RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 IFNA8P32881 189 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 HK3P52790 923 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 VAC14Q08AM6 782 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 VEPH1Q14D04 833 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 LYPLAL1Q5VWZ2 237 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 KIAA1841Q6NSI8 718 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 C16orf59Q7L2K0 433 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 PROSER1Q86XN7 944 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ASCC1Q8N9N2 400 aaKnown RBP17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ALOXE3Q9BYJ1 711 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 GPR63Q9BZJ6 419 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ALG2Q9H553 416 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ABCB10Q9NRK6 738 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 LHX3Q9UBR4 397 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 PMF1-BGLAPU3KQ54 211 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 A0A1B0GTL3 188 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 H0Y858 1186 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 TSPAN3O60637 253 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 DLGAP3O95886 979 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 SPNP16150 400 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 ZNF7P17097 686 aaPredicted RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 RPS3P23396 243 aaKnown RBP eCLIP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 CLCN7P51798 805 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 P2RX3P56373 397 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 PRKG2Q13237 762 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 C6orf136Q5SQH8 315 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 CATSPEREQ5SY80 951 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 TMEM236Q5W0B7 351 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 ADGRG5Q8IZF4 528 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 NDNFQ8TB73 568 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 BCL7CQ8WUZ0 217 aaPredicted RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 FIG4Q92562 907 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 KCTD14Q9BQ13 255 aaPredicted RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 TLR9Q9NR96 1032 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 HCSTQ9UBK5 93 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 BAG5Q9UL15 447 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 SATB2Q9UPW6 733 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 UGT2A1Q9Y4X1 527 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 ARPC2O15144 300 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 ABLIM3O94929 683 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 HTR1EP28566 365 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 GNG2P59768 71 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 RHOAP61586 193 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 TWF1Q12792 350 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 CAPRIN1Q14444 709 aaKnown RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 ARMC12Q5T9G4 340 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 LINC00299Q6ZSB3 139 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 FAM126BQ8IXS8 530 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 CARNMT1Q8N4J0 409 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 HJURPQ8NCD3 748 aaPredicted RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 PAPD5Q8NDF8 572 aaKnown RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 BPIFA1Q9NP55 256 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 HEBP1Q9NRV9 189 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 RABL2AQ9UBK7 228 aaPredicted RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 RAD51BO15315 384 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 GSNP06396 782 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 IL7RP16871 459 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 CRHBPP24387 322 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 RGS4P49798 205 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 EMX2Q04743 252 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 HIST2H2ACQ16777 129 aaPredicted RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 TBPL2Q6SJ96 375 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 TBC1D21Q8IYX1 336 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 DPP10Q8N608 796 aa17.56■□□□□ 0.4
RAB40C-203ENST00000535977 EIF2B4Q9UI10 523 aaKnown RBP17.56■□□□□ 0.4
RAB40C-203ENST00000535977 CCNKO75909 580 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 OR4F21O95013 312 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 HTR1AP08908 422 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 MSH3P20585 1137 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 ALDH4A1P30038 563 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 PRDX3P30048 256 aaKnown RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 MAPK8P45983 427 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 GSK3BP49841 420 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 CBX2Q14781 532 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 DPY19L1Q2PZI1 675 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 SMU1Q2TAY7 513 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 METTL2BQ6P1Q9 378 aaKnown RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 FNDC5Q8NAU1 212 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 FEM1AQ9BSK4 669 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 CLPBQ9H078 707 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 M0R3G1 203 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 ARNTLO00327 626 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 TBL1XO60907 577 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 INMTO95050 263 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 OTCP00480 354 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 ALBP02768 609 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 KRT8P05787 483 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 IRF1P10914 325 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 ITIH1P19827 911 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 ZFP36L2P47974 494 aaKnown RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 UFM1P61960 85 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 LSM3P62310 102 aaKnown RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 LIPEQ05469 1076 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 FPGSQ05932 587 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 SKIV2LQ15477 1246 aaKnown RBP17.55■□□□□ 0.4
RAB40C-203ENST00000535977 ADCK1Q86TW2 530 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 ZFAND4Q86XD8 727 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 GRAMD2AQ8IUY3 354 aa17.55■□□□□ 0.4
RAB40C-203ENST00000535977 HID1Q8IV36 788 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms