RNA–Protein interactions for RNA: ENST00000535477.5

CLPB-205, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-205ENST00000535477 SDR39U1Q9NRG7 319 aaPredicted RBP18.3■□□□□ 0.52
CLPB-205ENST00000535477 SLC23A2Q9UGH3 650 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 MANBAO00462 879 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 C1orf105O95561 183 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 ACADVLP49748 655 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 MRPS21P82921 87 aaKnown RBP18.3■□□□□ 0.52
CLPB-205ENST00000535477 SMAD4Q13485 552 aaKnown RBP18.3■□□□□ 0.52
CLPB-205ENST00000535477 AP5B1Q2VPB7 878 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 LAYNQ6UX15 382 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 NET1Q7Z628 596 aaPredicted RBP18.3■□□□□ 0.52
CLPB-205ENST00000535477 AMZ2Q86W34 360 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 THOC6Q86W42 341 aaKnown RBP18.3■□□□□ 0.52
CLPB-205ENST00000535477 TP53I13Q8NBR0 393 aaPredicted RBP18.3■□□□□ 0.52
CLPB-205ENST00000535477 HM13Q8TCT9 377 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 DNASE1L2Q92874 299 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 CDRT15Q96T59 188 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 SLC25A23Q9BV35 468 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 C1QTNF2Q9BXJ5 285 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 TEX101Q9BY14 249 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 CD93Q9NPY3 652 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 NKX1-2Q9UD57 310 aaPredicted RBP18.3■□□□□ 0.52
CLPB-205ENST00000535477 PSMD13Q9UNM6 376 aa18.3■□□□□ 0.52
CLPB-205ENST00000535477 CLGNO14967 610 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 CHUKO15111 745 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 LSM1O15116 133 aaKnown RBP18.29■□□□□ 0.52
CLPB-205ENST00000535477 ACADMP11310 421 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 HALP42357 657 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 HMGCS1Q01581 520 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 AGERQ15109 404 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 RFTN2Q52LD8 501 aaPredicted RBP18.29■□□□□ 0.52
CLPB-205ENST00000535477 KIAA1324Q6UXG2 1013 aaKnown RBP18.29■□□□□ 0.52
CLPB-205ENST00000535477 TMEM92Q6UXU6 159 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 LRRTM4Q86VH4 590 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 PLCD3Q8N3E9 789 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 FBXW8Q8N3Y1 598 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 FBRSQ9HAH7 460 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 CD248Q9HCU0 757 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 AIG1Q9NVV5 245 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 COLQQ9Y215 455 aaPredicted RBP18.29■□□□□ 0.52
CLPB-205ENST00000535477 DOCK9Q9BZ29 2069 aa18.29■□□□□ 0.52
CLPB-205ENST00000535477 ZFC3H1O60293 1989 aaKnown RBP18.29■□□□□ 0.52
CLPB-205ENST00000535477 TMEM265A0A087WTH1 108 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 SLC31A1O15431 190 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 NRP2O60462 931 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 PRAMEF4O60810 478 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 SLC2A4P14672 509 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 CCND1P24385 295 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 IMPA1P29218 277 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 MAPK9P45984 424 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 NEK2P51955 445 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 CHIT1Q13231 466 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 TSTA3Q13630 321 aaPredicted RBP18.28■□□□□ 0.52
CLPB-205ENST00000535477 IMPG1Q17R60 797 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 VPS26BQ4G0F5 336 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 PRAMEF9Q5VWM5 478 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 KIAA1161Q6NSJ0 714 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 PGM2L1Q6PCE3 622 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 PGAM4Q8N0Y7 254 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 LMNTD1Q8N9Z9 388 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 ATL1Q8WXF7 558 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 MRGPRX1Q96LB2 322 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 TEX37Q96LM6 180 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 NDRG2Q9UN36 371 aaKnown RBP18.28■□□□□ 0.52
CLPB-205ENST00000535477 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
CLPB-205ENST00000535477 MRASO14807 208 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 RGS14O43566 566 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 KRT6AP02538 564 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 KRT6BP04259 564 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 DPP6P42658 865 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 KRT6CP48668 564 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 UFM1P61960 85 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 TMEM259Q4ZIN3 620 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 BNC2Q6ZN30 1099 aaPredicted RBP18.28■□□□□ 0.52
CLPB-205ENST00000535477 RNF148Q8N7C7 305 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 FAM3CQ92520 227 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 PHF7Q9BWX1 381 aaPredicted RBP18.28■□□□□ 0.52
CLPB-205ENST00000535477 NCKAP1Q9Y2A7 1128 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 CCL27Q9Y4X3 112 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 COL4A2P08572 1712 aa18.28■□□□□ 0.52
CLPB-205ENST00000535477 SLC28A1O00337 649 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 PDYNP01213 254 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 TRIM23P36406 574 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 PPP2CBP62714 309 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 PPP2CAP67775 309 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 LRP8Q14114 963 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 TRMT5Q32P41 509 aaKnown RBP18.27■□□□□ 0.52
CLPB-205ENST00000535477 TMEM31Q5JXX7 168 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 IL23RQ5VWK5 629 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 CHST15Q7LFX5 561 aaPredicted RBP18.27■□□□□ 0.52
CLPB-205ENST00000535477 HORMAD1Q86X24 394 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 SYTL1Q8IYJ3 562 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 RGL4Q8IZJ4 473 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 PHC3Q8NDX5 983 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 FLCNQ8NFG4 579 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 SELENOMQ8WWX9 145 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 STMN2Q93045 179 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 SLC29A3Q9BZD2 475 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 DPEP2Q9H4A9 486 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 ELOVL6Q9H5J4 265 aa18.27■□□□□ 0.52
CLPB-205ENST00000535477 RNPEPL1Q9HAU8 725 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms