RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CYP2U1Q7Z449 544 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SLITRK4Q8IW52 837 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PARP8Q8N3A8 854 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 NR4A3Q92570 626 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 S100PBPQ96BU1 408 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF224Q9NZL3 707 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 RBM7Q9Y580 266 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ILVBLA1L0T0 632 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 MYBPHLA2RUH7 354 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 HTR3EA5X5Y0 456 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 YJEFN3A6XGL0 299 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 FFAR2O15552 330 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 GATBO75879 557 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SNAPC5O75971 98 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 UBXN7O94888 489 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 DNASE1L1P49184 302 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SEPHS1P49903 392 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ALDH3A2P51648 485 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CAP1Q01518 475 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 GAD2Q05329 585 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CNPY1Q3B7I2 92 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SLC9B1Q4ZJI4 515 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SPIN4Q56A73 249 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CXorf57Q6NSI4 855 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PARGQ86W56 976 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 LRRC58Q96CX6 371 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 MRM3Q9HC36 420 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 POLR3BQ9NW08 1133 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 POFUT2Q9Y2G5 429 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TESMINQ9Y4I5 508 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 SOWAHBA6NEL2 793 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 FAM25EA8MYX2 175 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 EFCAB9A8MZ26 197 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 NT5C1B-RDH14C9J2C7 533 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TFPIP10646 304 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PTPN2P17706 415 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PPP3R1P63098 170 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 EIF5AP63241 154 aaKnown RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 PHC1P78364 1004 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 NCBP2-AS2Q69YL0 99 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 FRRS1Q6ZNA5 592 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 QSOX2Q6ZRP7 698 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF433Q8N7K0 673 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ZNF317Q96PQ6 595 aaPredicted RBP6.88□□□□□ -1.31
CTNND1-236ENST00000533667 GPER1Q99527 375 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 MND1Q9BWT6 205 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TAPBPLQ9BX59 468 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 IRF2BPLQ9H1B7 796 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 EXO5Q9H790 373 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ABCB9Q9NP78 766 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 TMEM9Q9P0T7 183 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 GRIP1Q9Y3R0 1128 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 CACNA1FO60840 1977 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 ATRNL1Q5VV63 1379 aa6.88□□□□□ -1.31
CTNND1-236ENST00000533667 FABP12A6NFH5 140 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 hCG_2039718K7EN88 272 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 OR1F1O43749 312 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NCK1P16333 377 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PSMD8P48556 350 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ATP4BP51164 291 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 GARNL3Q5VVW2 1013 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ZBTB46Q86UZ6 589 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 GOLM1Q8NBJ4 401 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 OR52J3Q8NH60 311 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SLC22A18Q96BI1 424 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TRNT1Q96Q11 434 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 MNTQ99583 582 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 EBF4Q9BQW3 602 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 POLR2J3Q9H1A7 115 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TTYH1Q9H313 450 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NKIRAS2Q9NYR9 191 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PCDHGA10Q9Y5H3 936 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 OR14I1A6ND48 311 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 LRRC72A6NJI9 287 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 OR2AG2A6NM03 316 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 BTBD19C9JJ37 291 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 M0R2N6 131 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 EI24O14681 340 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 B3GALT2O43825 422 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 HCN1O60741 890 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 USP2O75604 605 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ALPPP05187 535 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 CREB1P16220 341 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 GRK6P43250 576 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NDUFV1P49821 464 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 DGKZQ13574 1117 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 PAFAH1B3Q15102 231 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 UBXN11Q5T124 520 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 SLC9A4Q6AI14 798 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TMEM220Q6QAJ8 160 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 LINGO4Q6UY18 593 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 ADGRD2Q7Z7M1 963 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 NAT16Q8N8M0 369 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TSPEARQ8WU66 669 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 TNFAIP8L1Q8WVP5 186 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 LCN9Q8WX39 176 aa6.87□□□□□ -1.31
CTNND1-236ENST00000533667 GEMIN6Q8WXD5 167 aaKnown RBP6.87□□□□□ -1.31
CTNND1-236ENST00000533667 RBM18Q96H35 190 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms