RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 TYMPP19971 482 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ACTN2P35609 894 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 NNMTP40261 264 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 MTHFRP42898 656 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 TPD52P55327 224 aaPredicted RBP2.42□□□□□ -2.02
ATM-220ENST00000533526 SNRPD1P62314 119 aaKnown RBP2.42□□□□□ -2.02
ATM-220ENST00000533526 DMPKQ09013 629 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 LMOD3Q0VAK6 560 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 HSPB3Q12988 150 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 TMEM187Q14656 261 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ITPRIPL2Q3MIP1 535 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ELFN2Q5R3F8 820 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 WDR78Q5VTH9 848 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 GARNL3Q5VVW2 1013 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ZNF772Q68DY9 489 aaPredicted RBP2.42□□□□□ -2.02
ATM-220ENST00000533526 GPR139Q6DWJ6 353 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 C11orf63Q6NUN7 778 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 TEX38Q6PEX7 206 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 PIGZQ86VD9 579 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 TMEM139Q8IV31 216 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 LINC00346Q8IVM7 164 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 SCML4Q8N228 414 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ARHGAP24Q8N264 748 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 TMEM178AQ8NBL3 297 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ZNF485Q8NCK3 441 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 NPEPL1Q8NDH3 523 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ZFAND2BQ8WV99 257 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 ARSGQ96EG1 525 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 POM121L2Q96KW2 1035 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 GCNAQ96QF7 691 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 RAD9AQ99638 391 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 NUDT16L1Q9BRJ7 211 aaKnown RBP2.42□□□□□ -2.02
ATM-220ENST00000533526 TRIM51Q9BSJ1 452 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 URM1Q9BTM9 101 aaKnown RBP2.42□□□□□ -2.02
ATM-220ENST00000533526 NUP85Q9BW27 656 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 GFRA4Q9GZZ7 299 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 TRPV4Q9HBA0 871 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 A4GALTQ9NPC4 353 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 CRNNQ9UBG3 495 aaPredicted RBP2.42□□□□□ -2.02
ATM-220ENST00000533526 CACNG4Q9UBN1 327 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 LRWD1Q9UFC0 647 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 CHORDC1Q9UHD1 332 aaPredicted RBP2.42□□□□□ -2.02
ATM-220ENST00000533526 RASAL2Q9UJF2 1139 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 TUBE1Q9UJT0 475 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 RIPK3Q9Y572 518 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 SMCHD1A6NHR9 2005 aa2.42□□□□□ -2.02
ATM-220ENST00000533526 A0A087X002 238 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 hCG_1809904A0A1W2PP81 198 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 A0A1W2PPE2 198 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 A0A1W2PR64 198 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 ZNF197O14709 1029 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 MEIS2O14770 477 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 KHDRBS3O75525 346 aaKnown RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 ZNF821O75541 412 aaPredicted RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 CDC123O75794 336 aaPredicted RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 STARD3NLO95772 234 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 IGHV2-70P01814 119 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 ABCB1P08183 1280 aaPredicted RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 IGHV4-31P0DP07 118 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 HSPA8P11142 646 aaKnown RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 MNDAP41218 407 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 CDH13P55290 713 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 PSMC6P62333 389 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 ODF4Q2M2E3 257 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 SGSM1Q2NKQ1 1148 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 CTU2Q2VPK5 515 aaKnown RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 ADAMTSL4-AS1Q5T5F5 129 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 CFAP58Q5T655 872 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 TMEM211Q6ICI0 200 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 PRPF39Q86UA1 669 aaKnown RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 POMGNT2Q8NAT1 580 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 DBF4BQ8NFT6 615 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 SSMEM1Q8WWF3 244 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 ARHGAP45Q92619 1136 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 ZNF653Q96CK0 615 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 OLFM1Q99784 485 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 SYT15Q9BQS2 421 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 FUCA2Q9BTY2 467 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 MCRIP2Q9BUT9 160 aaKnown RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 MXD3Q9BW11 206 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 CCDC106Q9BWC9 280 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 MTMR12Q9C0I1 747 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 EGLN1Q9GZT9 426 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 FAM49AQ9H0Q0 323 aaPredicted RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 S1PR5Q9H228 398 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 PPANQ9NQ55 473 aaKnown RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 CACNG5Q9UF02 275 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 EXOGQ9Y2C4 368 aaKnown RBP2.41□□□□□ -2.02
ATM-220ENST00000533526 PYGO1Q9Y3Y4 419 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 PCDH11YQ9BZA8 1340 aa2.41□□□□□ -2.02
ATM-220ENST00000533526 NDUFAF8A1L188 74 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 ANTXRLA6NF34 631 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 NEMP2A6NFY4 417 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 MSGN1A6NI15 193 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 C2orf81A6NN90 581 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 ENO4A6NNW6 628 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 HMGB1P1B2RPK0 211 aaPredicted RBP2.4□□□□□ -2.03
ATM-220ENST00000533526 EPHB6O15197 1021 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 DCXO43602 365 aa2.4□□□□□ -2.03
ATM-220ENST00000533526 ERAL1O75616 437 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms