RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 ZCWPW2A0A1B0GU75 182 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 MROH6A6NGR9 719 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 A6NL46 340 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 SMIM23A6NLE4 172 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 POC1B-GALNT4F8VUJ3 575 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 PSMD11O00231 422 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 RASGRF2O14827 1237 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZG16O60844 167 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 PIAS1O75925 651 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 C1QAP02745 245 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 CTPS1P17812 591 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 VIPR1P32241 457 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 STX2P32856 288 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 GPR1P46091 355 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 RRADP55042 308 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 DPTQ07507 201 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 LAMB3Q13751 1172 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 FRG1Q14331 258 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 CRYMQ14894 314 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 LONRF1Q17RB8 773 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 KRT71Q3SY84 523 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 TSTD2Q5T7W7 516 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 LYPLAL1Q5VWZ2 237 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 ADAMTSL4Q6UY14 1074 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 MARK2Q7KZI7 788 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 NLRP9Q7RTR0 991 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 PRSS42Q7Z5A4 293 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 CBARPQ8N350 705 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 SPOCK2Q92563 424 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 MRRFQ96E11 262 aaKnown RBP11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 TGM7Q96PF1 710 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 CYTH2Q99418 400 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 ACSS3Q9H6R3 686 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 SMYD2Q9NRG4 433 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 LATS2Q9NRM7 1088 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 COPG2Q9UBF2 871 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 CPNE7Q9UBL6 633 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 TBC1D29Q9UFV1 150 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLC2A6Q9UGQ3 507 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZNHIT2Q9UHR6 403 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 RARRES3Q9UL19 164 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 MED13LQ71F56 2210 aa11.02□□□□□ -0.65
TRAPPC4-213ENST00000533149 A0A0J9YYE9 177 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 A0A1B0GTL3 188 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 A0A1B0GUH1 482 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 EXOC1LA0A1B0GW35 172 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 FAM159BA6NKW6 160 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 CXorf49A8MYA2 514 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 AURKAO14965 403 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 LDB2O43679 373 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 BUD23O43709 281 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 KLHL41O60662 606 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 UBXN7O94888 489 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 CRTAMO95727 393 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 TRBC1P01850 177 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 ALPPP05187 535 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 PYGLP06737 847 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 MYZAPP0CAP1 466 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 ERVK-10P10266 1014 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 CYP2A6P11509 494 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 F3P13726 295 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 AMD1P17707 334 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 SLCO1A2P46721 670 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 MGAT5Q09328 741 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 ART3Q13508 389 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 EFTUD2Q15029 972 aaKnown RBP eCLIP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 TESK1Q15569 626 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 TAF1AQ15573 450 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 KLHL38Q2WGJ6 581 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 KBTBD12Q3ZCT8 623 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 VWA5B1Q5TIE3 1220 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 PWWP2BQ6NUJ5 590 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 FAM199XQ6PEV8 388 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 Q6ZVL8 140 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 HSD11B1LQ7Z5J1 315 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 CROCCP2Q86T23 111 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 NDUFAF2Q8N183 169 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 TTC30BQ8N4P2 665 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 PPM1NQ8N819 430 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 ADAMTS17Q8TE56 1095 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 EPS8L3Q8TE67 593 aaKnown RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 KLHL6Q8WZ60 621 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 ARL8AQ96BM9 186 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 SH3GL2Q99962 352 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 CENPHQ9H3R5 247 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 TMBIM4Q9HC24 238 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 MAGEE1Q9HCI5 957 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 TREX1Q9NSU2 369 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 C20orf96Q9NUD7 363 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 HACD3Q9P035 362 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 VPS18Q9P253 973 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 OSGIN2Q9Y236 505 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 PPIL1Q9Y3C6 166 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 KLF2Q9Y5W3 355 aaPredicted RBP11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 ARL5AQ9Y689 179 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 PDZD2O15018 2839 aa11.01□□□□□ -0.65
TRAPPC4-213ENST00000533149 ZFHX3Q15911 3703 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 A0A0U1RQS6 177 aa11□□□□□ -0.65
TRAPPC4-213ENST00000533149 GOLGA6L10A6NI86 522 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms