RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 UBLCP1Q8WVY7 318 aaPredicted RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 ASZ1Q8WWH4 475 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 WBP1Q96G27 269 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 RMDN2Q96LZ7 410 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 CD180Q99467 661 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 CPNE1Q99829 537 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 AARSD1Q9BTE6 412 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 IMP3Q9NV31 184 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 SLC24A2Q9UI40 661 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 CFAP20Q9Y6A4 193 aaKnown RBP12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 IKBKGQ9Y6K9 419 aa12.59□□□□□ -0.39
TRAPPC4-212ENST00000533058 OR5K3A6NET4 321 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 EFSO43281 561 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 TUBBP07437 444 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 AOAHP28039 575 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 GABRB3P28472 473 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 PDHA2P29803 388 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 GP5P40197 560 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 IL11RAQ14626 422 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 TGIF1Q15583 401 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 RBM20Q5T481 1227 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 ANKS6Q68DC2 871 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 FAM45BPQ6NSW5 357 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 ZNF549Q6P9A3 640 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 CYB5D1Q6P9G0 228 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 GALNT7Q86SF2 657 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 ZC3HC1Q86WB0 502 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 KMT5CQ86Y97 462 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 ZBTB2Q8N680 514 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 SIDT2Q8NBJ9 832 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 FAM45AQ8TCE6 357 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 NKD1Q969G9 470 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 SLC41A2Q96JW4 573 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 TGM7Q96PF1 710 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 GPR21Q99679 349 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 RHOJQ9H4E5 214 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 ACSS3Q9H6R3 686 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 MVB12BQ9H7P6 319 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 CPNE5Q9HCH3 593 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 TAS2R13Q9NYV9 303 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 TRMT6Q9UJA5 497 aaKnown RBP12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 PILRAQ9UKJ1 303 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 CORO1CQ9ULV4 474 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 TMEM184BQ9Y519 407 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 IGSF10Q6WRI0 2623 aa12.58□□□□□ -0.4
TRAPPC4-212ENST00000533058 FAM95CA0A1B0GW59 222 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 POC1B-GALNT4F8VUJ3 575 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 ERVH48-1M5A8F1 160 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 AGRPO00253 132 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 MATN2O00339 956 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 POLR1CO15160 346 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 ATXN7O15265 892 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 RIPK2O43353 540 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 FAM155BO75949 473 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 INHBAP08476 426 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 NELFEP18615 380 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 SPRP35270 261 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 ATP1A2P50993 1020 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 ILF2Q12905 390 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 PDAP1Q13442 181 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 MAP7Q14244 749 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 PLCL1Q15111 1095 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 KLHL38Q2WGJ6 581 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 PLEKHS1Q5SXH7 462 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 GRTP1Q5TC63 336 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 ARHGAP40Q5TG30 622 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 HECTD2Q5U5R9 776 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 CACHD1Q5VU97 1274 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 BPHLQ86WA6 291 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 OOSP2Q86WS3 158 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 ACVR1CQ8NER5 493 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 CFAP61Q8NHU2 1237 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 KCNJ9Q92806 393 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 PMEPA1Q969W9 287 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 VPS39Q96JC1 886 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 CCDC77Q9BR77 488 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 TRIT1Q9H3H1 467 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 TFB2MQ9H5Q4 396 aaKnown RBP12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 HRASLS2Q9NWW9 162 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 KLHL3Q9UH77 587 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 SLC39A10Q9ULF5 831 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 VWA7Q9Y334 891 aa12.57□□□□□ -0.4
TRAPPC4-212ENST00000533058 EXOC1LA0A1B0GW35 172 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 SLC5A10A0PJK1 596 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 TLCD2A6NGC4 264 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 KIF1CO43896 1103 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 ABHD2P08910 425 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 FGF5P12034 268 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 MAP4P27816 1152 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 SKIV2L2P42285 1042 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 MSH2P43246 934 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 CDKN2DP55273 166 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 ABRQ12979 859 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 SLC29A2Q14542 456 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 USP10Q14694 798 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 MANEAQ5SRI9 462 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 IRGCQ6NXR0 463 aa12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 DUS1LQ6P1R4 473 aaKnown RBP12.56□□□□□ -0.4
TRAPPC4-212ENST00000533058 EMBQ6PCB8 327 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms