RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 CBSP35520 551 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CCNFP41002 786 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 RAB28P51157 221 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CUL1Q13616 776 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CCSMST1Q4G0I0 132 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 DCAF12Q5T6F0 453 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 UGT3A1Q6NUS8 523 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 TTC23LQ6PF05 361 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CAPN12Q6ZSI9 719 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CCDC25Q86WR0 208 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 RASGRP3Q8IV61 690 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 D2HGDHQ8N465 521 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 LINC01555Q8NAE3 123 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 DCBLD2Q96PD2 775 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 OR2A14Q96R47 310 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CTRCQ99895 268 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 MCMBPQ9BTE3 642 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 PITPNM3Q9BZ71 974 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 SPRY4Q9C004 299 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 LRRC4CQ9HCJ2 640 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 TAS2R13Q9NYV9 303 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 CIDEBQ9UHD4 219 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 TSR3Q9UJK0 312 aaKnown RBP19.23■□□□□ 0.67
CPSF1-209ENST00000532725 VWA7Q9Y334 891 aa19.23■□□□□ 0.67
CPSF1-209ENST00000532725 DSPP15924 2871 aaKnown RBP19.23■□□□□ 0.67
CPSF1-209ENST00000532725 KMT2BQ9UMN6 2715 aaPredicted RBP19.23■□□□□ 0.67
CPSF1-209ENST00000532725 TCRBV9S1A1TA0A576 114 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 SLC9B1P1A6NJY1 282 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 POLR1CO15160 346 aaPredicted RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 RRP8O43159 456 aaKnown RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 PIAS1O75925 651 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 ZBTB11O95625 1053 aaPredicted RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 C1QAP02745 245 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 MPC1LP0DKB6 136 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 ENO3P13929 434 aaPredicted RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 FOLR1P15328 257 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 CD82P27701 267 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 BDKRB1P46663 353 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 HSD11B2P80365 405 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 HECTD2Q5U5R9 776 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 PAQR3Q6TCH7 311 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 STRA8Q7Z7C7 330 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 SLC26A11Q86WA9 606 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 ZC3HC1Q86WB0 502 aaKnown RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 ZFAND4Q86XD8 727 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 MAGEC3Q8TD91 643 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 ASB11Q8WXH4 323 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 NAF1Q96HR8 494 aaKnown RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 IL17FQ96PD4 163 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 TEFMQ96QE5 360 aaKnown RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 ZPBPQ9BS86 351 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 DPH1Q9BZG8 443 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 CORO1CQ9ULV4 474 aaPredicted RBP19.22■□□□□ 0.67
CPSF1-209ENST00000532725 SSUH2Q9Y2M2 353 aa19.22■□□□□ 0.67
CPSF1-209ENST00000532725 CXorf49A8MYA2 514 aaPredicted RBP19.21■□□□□ 0.67
CPSF1-209ENST00000532725 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.21■□□□□ 0.67
CPSF1-209ENST00000532725 GFYI3L273 518 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 EIF3FO00303 357 aaPredicted RBP19.21■□□□□ 0.67
CPSF1-209ENST00000532725 RASGRF2O14827 1237 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 UGT2B7P16662 529 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 CDH3P22223 829 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 MCM3P25205 808 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 ITPKBP27987 946 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 PEBP1P30086 187 aaKnown RBP19.21■□□□□ 0.67
CPSF1-209ENST00000532725 FOXM1Q08050 763 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 IL11RAQ14626 422 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 KCNAB1Q14722 419 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 SPESP1Q6UW49 350 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 CEACAM20Q6UY09 585 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 DTX1Q86Y01 620 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 CPNE9Q8IYJ1 553 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 LMNTD1Q8N9Z9 388 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 OR2L8Q8NGY9 312 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 KCNE4Q8WWG9 221 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 TRAPPC9Q96Q05 1148 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 OR6C1Q96RD1 312 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 FAM129AQ9BZQ8 928 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 NSMCE4AQ9NXX6 385 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 TRMT6Q9UJA5 497 aaKnown RBP19.21■□□□□ 0.67
CPSF1-209ENST00000532725 SLC39A10Q9ULF5 831 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 BTRCQ9Y297 605 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 ZFHX4Q86UP3 3567 aa19.21■□□□□ 0.67
CPSF1-209ENST00000532725 KRT87PA6NCN2 255 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 FAM159BA6NKW6 160 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 ARHGEF33A8MVX0 844 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 FDXRP22570 491 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 PGGT1BP53609 377 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 CLN3Q13286 438 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 KIR2DS3Q14952 304 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.2■□□□□ 0.66
CPSF1-209ENST00000532725 LRRC69Q6ZNQ3 347 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 SPACA3Q8IXA5 215 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 C2orf73Q8N5S3 287 aaPredicted RBP19.2■□□□□ 0.66
CPSF1-209ENST00000532725 GPATCH11Q8N954 259 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 FBXO15Q8NCQ5 510 aaPredicted RBP19.2■□□□□ 0.66
CPSF1-209ENST00000532725 HMGCLL1Q8TB92 370 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 DENND1AQ8TEH3 1009 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 EEF1AKMT1Q8WVE0 214 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 IFT81Q8WYA0 676 aa19.2■□□□□ 0.66
CPSF1-209ENST00000532725 OLFM1Q99784 485 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms