RNA–Protein interactions for RNA: ENST00000529524.1

PSMA1-208, Transcript of proteasome subunit alpha 1, human

TSL 3

Gene PSMA1, Length 743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMA1-208	ENST00000529524	NDUFS4	O43181	175 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	ZNF217	O75362	1048 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	PTP4A3	O75365	173 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	WISP2	O76076	250 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	GABRB1	P18505	474 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	CAPN3	P20807	821 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	CEACAM8	P31997	349 aa	Predicted RBP	3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	PSMB10	P40306	273 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	MFAP4	P55083	255 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	SNRPE	P62304	92 aa	Known RBP	3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	PPP2R2B	Q00005	443 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	PLA2G7	Q13093	441 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	ITPRIPL1	Q6GPH6	555 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	CFAP77	Q6ZQR2	320 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	C1orf122	Q6ZSJ8	110 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	ATG9A	Q7Z3C6	839 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	MCEMP1	Q8IX19	187 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	DNAJC22	Q8N4W6	341 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	ZNF611	Q8N823	705 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	SMPDL3B	Q92485	455 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	DACH2	Q96NX9	599 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	RTP3	Q9BQQ7	232 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	SDF4	Q9BRK5	362 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	CHCHD6	Q9BRQ6	235 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	HGH1	Q9BTY7	390 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	HRH4	Q9H3N8	390 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	CHMP1A	Q9HD42	196 aa	Predicted RBP	3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	CCDC177	Q9NQR7	707 aa	Predicted RBP	3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	HAUS2	Q9NVX0	235 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	TRMT1	Q9NXH9	659 aa	Known RBP	3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	COQ3	Q9NZJ6	369 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	ZNF215	Q9UL58	517 aa	Predicted RBP	3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	EXO1	Q9UQ84	846 aa	Known RBP	3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	PCDHGA5	Q9Y5G8	931 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	EP400	Q96L91	3159 aa		3.56	□□□□□ -1.84
PSMA1-208	ENST00000529524	SLIT2	O94813	1529 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	COL5A2	P05997	1499 aa	Predicted RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	C1orf167	Q5SNV9	1468 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	NOS1	P29475	1434 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	ARHGEF10	O15013	1369 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	ANKRD30A	Q9BXX3	1397 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524		A0A087WW49	117 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	OR6C76	A6NM76	312 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	CDRT15L2	A8MXV6	281 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	PLK4	O00444	970 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	GPR137B	O60478	399 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	CSPG5	O95196	566 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	OR2C1	O95371	312 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	EDN1	P05305	212 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	TPO	P07202	933 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	H1F0	P07305	194 aa	Known RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	VPREB1	P12018	145 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	GATA1	P15976	413 aa	Predicted RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	MAPK4	P31152	587 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	MATR3	P43243	847 aa	Known RBP eCLIP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	PSMC4	P43686	418 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	RXRG	P48443	463 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	RPS18	P62269	152 aa	Known RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	MC1R	Q01726	317 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	GAGE2B	Q13066	116 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	GAGE2E	Q4V326	116 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	TMEM198	Q66K66	360 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	ADAL	Q6DHV7	355 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	GAGE2A	Q6NT46	116 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	ZNF534	Q76KX8	674 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	GALNT13	Q8IUC8	556 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	SCML4	Q8N228	414 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	C17orf53	Q8N3J3	647 aa	Predicted RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	OR2T12	Q8NG77	320 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	MAGED4	Q96JG8	741 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	PRAC1	Q96KF2	57 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	ZNF300	Q96RE9	604 aa	Predicted RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	TREX2	Q9BQ50	279 aa	Predicted RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	ZNF71	Q9NQZ8	489 aa	Predicted RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	MIOS	Q9NXC5	875 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	GAGE2D	Q9UEU5	116 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	AMACR	Q9UHK6	382 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	TSPYL4	Q9UJ04	414 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	CEP152	O94986	1710 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	RGPD1	P0DJD0	1748 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	MAST1	Q9Y2H9	1570 aa		3.55	□□□□□ -1.84
PSMA1-208	ENST00000529524	LMTK2	Q8IWU2	1503 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	MYOM2	P54296	1465 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	HFM1	A2PYH4	1435 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	CCDC144A	A2RUR9	1427 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	ZFYVE9	O95405	1425 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	ANKRD18B	A2A2Z9	1011 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524		A6NCN8	305 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	MITF	O75030	526 aa	Predicted RBP	3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	RSL1D1	O76021	490 aa	Known RBP	3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	FAM157C	P0CG43	387 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	ACADS	P16219	412 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	CKMT2	P17540	419 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	SAT1	P21673	171 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	TM4SF1	P30408	202 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	HADHA	P40939	763 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	WNT5A	P41221	380 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	MMP15	P51511	669 aa		3.54	□□□□□ -1.84
PSMA1-208	ENST00000529524	CDH11	P55287	796 aa		3.54	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms