RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	TMEM150C	B9EJG8	249 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362		H3BMM5	538 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	KPNA5	O15131	536 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	PFDN6	O15212	129 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	KDM1A	O60341	852 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	CPNE3	O75131	537 aa	Known RBP	11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	BANF1	O75531	89 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	SCRG1	O75711	98 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	MT-ND3	P03897	115 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	RPN2	P04844	631 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	FAM87A	P0C7U9	286 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	OAS2	P29728	719 aa	Known RBP	11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	DLST	P36957	453 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	SLC1A2	P43004	574 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	BDKRB1	P46663	353 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	RAB28	P51157	221 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	CDC20	Q12834	499 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	GPS2	Q13227	327 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	THOC5	Q13769	683 aa	Known RBP	11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	LONRF1	Q17RB8	773 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	MSS51	Q4VC12	460 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	ATP1A1-AS1	Q5TC04	95 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	IZUMO3	Q5VZ72	239 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	TMEM126B	Q8IUX1	230 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	KLHL7	Q8IXQ5	586 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	SLC38A9	Q8NBW4	561 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	OR1L3	Q8NH93	324 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	GSDMB	Q8TAX9	411 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	CT55	Q8WUE5	264 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	MED8	Q96G25	268 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	RUFY1	Q96T51	708 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	FAM60A	Q9NP50	221 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	INTS10	Q9NVR2	710 aa	Known RBP	11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	VPS9D1	Q9Y2B5	631 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	MED16	Q9Y2X0	877 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	SAR1B	Q9Y6B6	198 aa		11.36	□□□□□ -0.59
PSMC3-205	ENST00000528362	SETX	Q7Z333	2677 aa	Known RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	PIEZO2	Q9H5I5	2752 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362		A0A0J9YY10	115 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	RASGRF2	O14827	1237 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	HCRTR1	O43613	425 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	C1orf105	O95561	183 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	CCNYL3	P0C7X3	344 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	PKM	P14618	531 aa	Known RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	PGAM1	P18669	254 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	CHRM3	P20309	590 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	ATP5D	P30049	168 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	GABRA4	P48169	554 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	DR1	Q01658	176 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	C19orf57	Q0VDD7	668 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	CTBP1	Q13363	440 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	DNASE1L3	Q13609	305 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	CRYM	Q14894	314 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	KIR2DS3	Q14952	304 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	SLC5A12	Q1EHB4	618 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	DEFB110	Q30KQ9	67 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	CCSMST1	Q4G0I0	132 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	ACSBG2	Q5FVE4	666 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	ZNF549	Q6P9A3	640 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	BORA	Q6PGQ7	559 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	CNST	Q6PJW8	725 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	TAX1BP1	Q86VP1	789 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	HOOK3	Q86VS8	718 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	SPNS2	Q8IVW8	549 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	FAM20C	Q8IXL6	584 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	ZBTB2	Q8N680	514 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	OR2L8	Q8NGY9	312 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	GIMAP7	Q8NHV1	300 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	DENND1A	Q8TEH3	1009 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	SKA2	Q8WVK7	121 aa	Predicted RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	TCTN2	Q96GX1	697 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	SLC30A3	Q99726	388 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	TRIM51	Q9BSJ1	452 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	CHRNA10	Q9GZZ6	450 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	FANCE	Q9HB96	536 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	SYTL2	Q9HCH5	934 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	TSR3	Q9UJK0	312 aa	Known RBP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	PCDHB3	Q9Y5E6	796 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	PCDHGA6	Q9Y5G7	932 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	FAM169A	Q9Y6X4	670 aa		11.35	□□□□□ -0.59
PSMC3-205	ENST00000528362	ISM1	B1AKI9	464 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	C21orf140	B9A014	251 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362		H3BMH7	237 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	KATNA1	O75449	491 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	MATN4	O95460	622 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	TCN2	P20062	427 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	CYP2A7	P20853	494 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	CD9	P21926	228 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	RORA	P35398	523 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	CLCN7	P51798	805 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	ITGA1	P56199	1179 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	MPP1	Q00013	466 aa		11.34	□□□□□ -0.59
PSMC3-205	ENST00000528362	MC1R	Q01726	317 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms