RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 OGFRQ9NZT2 677 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 ZNF624Q9P2J8 865 aaPredicted RBP5.6□□□□□ -1.51
PCF11-202ENST00000528336 DNAJB9Q9UBS3 223 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 ICAM5Q9UMF0 924 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 NENFQ9UMX5 172 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 IFT172Q9UG01 1749 aa5.6□□□□□ -1.51
PCF11-202ENST00000528336 TONSLQ96HA7 1378 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 CNTNAP2Q9UHC6 1331 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 KRT87PA6NCN2 255 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 OLFM2O95897 454 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 HEXBP07686 556 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 SRPRAP08240 638 aaKnown RBP5.59□□□□□ -1.51
PCF11-202ENST00000528336 AMD1P17707 334 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 POLR2CP19387 275 aaPredicted RBP5.59□□□□□ -1.51
PCF11-202ENST00000528336 ARFIP1P53367 373 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 PSMC6P62333 389 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 SREBF2Q12772 1141 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 ZNF234Q14588 700 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 STXBP5Q5T5C0 1151 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 CFAP77Q6ZQR2 320 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 ASB18Q6ZVZ8 466 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 DSG4Q86SJ6 1040 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 TSPAN33Q86UF1 283 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 C17orf53Q8N3J3 647 aaPredicted RBP5.59□□□□□ -1.51
PCF11-202ENST00000528336 DENND6BQ8NEG7 585 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 OR13A1Q8NGR1 328 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 CTCFLQ8NI51 663 aaPredicted RBP5.59□□□□□ -1.51
PCF11-202ENST00000528336 ZNF75CPQ92670 426 aaPredicted RBP5.59□□□□□ -1.51
PCF11-202ENST00000528336 SYAP1Q96A49 352 aaPredicted RBP5.59□□□□□ -1.51
PCF11-202ENST00000528336 VPS33AQ96AX1 596 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 VPS39Q96JC1 886 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 CNDP1Q96KN2 507 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 NUDCD1Q96RS6 583 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 THUMPD3Q9BV44 507 aaKnown RBP5.59□□□□□ -1.51
PCF11-202ENST00000528336 THAP9Q9H5L6 903 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 MAGIXQ9H6Y5 334 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 TAS2R3Q9NYW6 316 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 LIPT1Q9Y234 373 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 KIF3AQ9Y496 699 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 ANGPTL3Q9Y5C1 460 aa5.59□□□□□ -1.51
PCF11-202ENST00000528336 NRXN3Q9Y4C0 1643 aa5.59□□□□□ -1.52
PCF11-202ENST00000528336 PRAG1Q86YV5 1406 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 METP08581 1390 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 A0A0B4J203 849 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ASPDHA6ND91 283 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 K7EPI3 171 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 CASQ2O14958 399 aaPredicted RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 ZNHIT1O43257 154 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 STX6O43752 255 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 XPNPEP2O43895 674 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 KLHL41O60662 606 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ENTPD3O75355 529 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 PNPP00491 289 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ACADLP28330 430 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 PBLDP30039 288 aaPredicted RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 HOXC8P31273 242 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 HSD17B4P51659 736 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 GPR143P51810 404 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ILF3Q12906 894 aaKnown RBP eCLIP5.58□□□□□ -1.52
PCF11-202ENST00000528336 AIMP2Q13155 320 aaKnown RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 NFE2L1Q14494 772 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 CEP55Q53EZ4 464 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ADALQ6DHV7 355 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 OR7E24Q6IFN5 339 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 LCN10Q6JVE6 187 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 FAM171BQ6P995 826 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 SHQ1Q6PI26 577 aaKnown RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 TRAT1Q6PIZ9 186 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 FIP1L1Q6UN15 594 aaKnown RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 PET117Q6UWS5 81 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 C9orf139Q6ZV77 190 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 PLEKHM3Q6ZWE6 761 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 RUFY3Q7L099 469 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ZNF771Q7L3S4 317 aaPredicted RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 HACE1Q8IYU2 909 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ADGRF2Q8IZF7 708 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 EMC1Q8N766 993 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 KBTBD3Q8NAB2 608 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 IL17RCQ8NAC3 791 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 POMGNT2Q8NAT1 580 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ANKRD20A12PQ8NF67 263 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 THAP6Q8TBB0 222 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 PDLIM5Q96HC4 596 aaKnown RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 PGAM5Q96HS1 289 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 RAB3IPQ96QF0 476 aaPredicted RBP5.58□□□□□ -1.52
PCF11-202ENST00000528336 TMEM39BQ9GZU3 492 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 LRMDAQ9H2I8 198 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 DNAJC18Q9H819 358 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 TAB2Q9NYJ8 693 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 COQ3Q9NZJ6 369 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 KCNG2Q9UJ96 466 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ANAPC5Q9UJX4 755 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 HPCAL4Q9UM19 191 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 CMAHPQ9Y471 501 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 AP1M2Q9Y6Q5 423 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 ALKQ9UM73 1620 aa5.58□□□□□ -1.52
PCF11-202ENST00000528336 LAMC1P11047 1609 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 LTBP4Q8N2S1 1624 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 A0A1W2PQ09 198 aa5.57□□□□□ -1.52
PCF11-202ENST00000528336 RGSL1A5PLK6 1076 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms