RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZNF470Q6ECI4 717 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 KLHL7Q8IXQ5 586 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 CFAP61Q8NHU2 1237 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 FLVCR1-AS1Q8TAF5 88 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 GABPB2Q8TAK5 448 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 SLC22A18Q96BI1 424 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 LRFN5Q96NI6 719 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 EBNA1BP2Q99848 306 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 TRIM56Q9BRZ2 755 aaKnown RBP11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 RAB11FIP5Q9BXF6 653 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 LHX9Q9NQ69 397 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 C20orf96Q9NUD7 363 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 SPHK1Q9NYA1 384 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 SERTAD3Q9UJW9 196 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 KCND3Q9UK17 655 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 PCDHGA6Q9Y5G7 932 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 COMMD10Q9Y6G5 202 aa11.71□□□□□ -0.53
TRAPPC4-209ENST00000528230 A0A0J9YY10 115 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 ISM1B1AKI9 464 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 C21orf140B9A014 251 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 E5RI56 91 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 RASGRF2O14827 1237 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 CPNE3O75131 537 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 NIPSNAP2O75323 286 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 SCRG1O75711 98 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 FKBP9O95302 570 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 MATN4O95460 622 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 C1orf105O95561 183 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 NTRK1P04629 796 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 SFTPCP11686 197 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 DLSTP36957 453 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 CTBP1Q13363 440 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 TBR1Q16650 682 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 ZNF789Q5FWF6 425 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 SPANXN3Q5MJ09 141 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 ZNF517Q6ZMY9 492 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 NEK10Q6ZWH5 1172 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 TMEM126BQ8IUX1 230 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 DENND6AQ8IWF6 608 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 UNC5BQ8IZJ1 945 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 PDIK1LQ8N165 341 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 RAB42Q8N4Z0 105 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 ZBTB2Q8N680 514 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 C19orf47Q8N9M1 422 aaKnown RBP11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 OR2L8Q8NGY9 312 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 HMGCLL1Q8TB92 370 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 LRRC39Q96DD0 335 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 MED8Q96G25 268 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 FAM167BQ9BTA0 163 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 GPR87Q9BY21 358 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 CCDC68Q9H2F9 335 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 IL17BQ9UHF5 180 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 CROTQ9UKG9 612 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 FBXO5Q9UKT4 447 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 SLC39A10Q9ULF5 831 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 PLAGL1Q9UM63 463 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 MGAQ8IWI9 3026 aa11.7□□□□□ -0.54
TRAPPC4-209ENST00000528230 SEC16AO15027 2179 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 TMEM150CB9EJG8 249 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 NDC80O14777 642 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 NKX2-8O15522 239 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 KLK3P07288 261 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 HBQ1P09105 142 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 PVRP15151 417 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 TCN2P20062 427 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 F8A1P23610 371 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 SLC1A2P43004 574 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 CLCN7P51798 805 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 CYP4F2P78329 520 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 C19orf57Q0VDD7 668 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 CBLBQ13191 982 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 CRYMQ14894 314 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 TTLL9Q3SXZ7 439 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 HSP90AA5PQ58FG0 334 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 HIBCHQ6NVY1 386 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 CDHR3Q6ZTQ4 885 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 KCNMB4Q86W47 210 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 LINC01555Q8NAE3 123 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 OR1L3Q8NH93 324 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 SKA2Q8WVK7 121 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 STARD8Q92502 1023 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 SEC14L1Q92503 715 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 KCNJ9Q92806 393 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 EXTL1Q92935 676 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 IL1RAPL1Q9NZN1 696 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 NFS1Q9Y697 457 aa11.69□□□□□ -0.54
TRAPPC4-209ENST00000528230 E7EQ34 232 aa11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 FANCGO15287 622 aa11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 TTI1O43156 1089 aa11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 PRICKLE3O43900 615 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 PSIP1O75475 530 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 CBSLP0DN79 551 aa11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 PEBP1P30086 187 aaKnown RBP11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 CBSP35520 551 aa11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 GABRA4P48169 554 aa11.68□□□□□ -0.54
TRAPPC4-209ENST00000528230 ITGA1P56199 1179 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms