RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 RNASEH2BQ5TBB1 312 aaKnown RBP31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 PAPD7Q5XG87 772 aaKnown RBP31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 RAB11FIP5Q9BXF6 653 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 GPR87Q9BY21 358 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 TUBD1Q9UJT1 453 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 SERTAD3Q9UJW9 196 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 PLAGL1Q9UM63 463 aa31.93■■■□□ 2.7
SSSCA1-205ENST00000527920 TMEM150CB9EJG8 249 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 USP1O94782 785 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 PRKAR1AP10644 381 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 OAS2P29728 719 aaKnown RBP31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 ABRQ12979 859 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 PTK6Q13882 451 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 CDHR3Q6ZTQ4 885 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 CENPUQ71F23 418 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 LMNTD2Q8IXW0 634 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 OR1L3Q8NH93 324 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 SLC22A18Q96BI1 424 aa31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 TRIM56Q9BRZ2 755 aaKnown RBP31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 MRPS18BQ9Y676 258 aaKnown RBP31.92■■■□□ 2.7
SSSCA1-205ENST00000527920 CD9P21926 228 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 FMO4P31512 558 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 CCR10P46092 362 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 GNG11P61952 73 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 ZNF470Q6ECI4 717 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 TTC23LQ6PF05 361 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 CFAP61Q8NHU2 1237 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 SEC14L1Q92503 715 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 SIGLEC10Q96LC7 697 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 DDX47Q9H0S4 455 aaKnown RBP31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 STARD5Q9NSY2 213 aa31.91■■■□□ 2.7
SSSCA1-205ENST00000527920 BAHCC1Q9P281 2608 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 PEBP1P30086 187 aaKnown RBP31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 CCNFP41002 786 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 ITGA1P56199 1179 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 GPS2Q13227 327 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 THOC5Q13769 683 aaKnown RBP31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 TRIM73Q86UV7 250 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 AGGF1Q8N302 714 aaeCLIP31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 LINC01555Q8NAE3 123 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 SLC38A9Q8NBW4 561 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 OR2L8Q8NGY9 312 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 RAD51AP1Q96B01 352 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 KLHL25Q9H0H3 589 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 ASIC3Q9UHC3 531 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 CRYL1Q9Y2S2 319 aa31.9■■■□□ 2.7
SSSCA1-205ENST00000527920 B8ZZF3 427 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 RASGRF2O14827 1237 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 NIPSNAP2O75323 286 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 CREG1O75629 220 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 S1PR4O95977 384 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 KLK3P07288 261 aaPredicted RBP31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 PKMP14618 531 aaKnown RBP31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 CYP2A7P20853 494 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 RORAP35398 523 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 POLE2P56282 527 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 LONRF1Q17RB8 773 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 SYDE1Q6ZW31 735 aaPredicted RBP31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 PCGF5Q86SE9 256 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 CALML6Q8TD86 181 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 FOPNLQ96NB1 174 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 RUNDC3BQ96NL0 473 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 NAPGQ99747 312 aaPredicted RBP31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 AKIRIN1Q9H9L7 192 aaPredicted RBP31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 MAD1L1Q9Y6D9 718 aa31.89■■■□□ 2.7
SSSCA1-205ENST00000527920 ISM1B1AKI9 464 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 DNALI1O14645 258 aaPredicted RBP31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 KATNA1O75449 491 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 C1orf105O95561 183 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 GABRA4P48169 554 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 ZIC1Q15915 447 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 IZUMO3Q5VZ72 239 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 C16orf46Q6P387 395 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 ZNF605Q86T29 641 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 CREG2Q8IUH2 290 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 DSELQ8IZU8 1212 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 MAGEC3Q8TD91 643 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 APOBEC4Q8WW27 367 aaKnown RBP31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 ACTR5Q9H9F9 607 aaPredicted RBP31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 FAM60AQ9NP50 221 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 KLHL42Q9P2K6 505 aa31.88■■■□□ 2.69
SSSCA1-205ENST00000527920 E7EQ34 232 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 MEN1O00255 615 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 FKBP9O95302 570 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 HBQ1P09105 142 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 RPS15P62841 145 aaKnown RBP31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 GPR135Q8IZ08 494 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 RAB42Q8N4Z0 105 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 HMGCLL1Q8TB92 370 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 SKA2Q8WVK7 121 aaPredicted RBP31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 ACTL8Q9H568 366 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 IL1RAPL1Q9NZN1 696 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 SLC39A10Q9ULF5 831 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 PYCARDQ9ULZ3 195 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 SAR1BQ9Y6B6 198 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 FAM169AQ9Y6X4 670 aa31.87■■■□□ 2.69
SSSCA1-205ENST00000527920 HELZ2Q9BYK8 2649 aaKnown RBP31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 MATN4O95460 622 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 CHRM3P20309 590 aa31.86■■■□□ 2.69
SSSCA1-205ENST00000527920 PTPN4P29074 926 aa31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms