RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 NPPAP01160 153 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 EFR3AQ14156 821 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 KLHL17Q6TDP4 642 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 Q6ZPB1 254 aaPredicted RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 GPRIN3Q6ZVF9 776 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ADAMTSL2Q86TH1 951 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ZFAND1Q8TCF1 268 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 SLC13A3Q8WWT9 602 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 GORASP2Q9H8Y8 452 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 SMURF1Q9HCE7 757 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 AGO1Q9UL18 857 aaKnown RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 NME7Q9Y5B8 376 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 NRCAMQ92823 1304 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 A0A0U1RQS6 177 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 BTN3A1O00481 513 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 PCDHGA12O60330 932 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 UROSP10746 265 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 CCR1P32246 355 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 RFX2P48378 723 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 AP2S1P53680 142 aaPredicted RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 MAXP61244 160 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 MXD1Q05195 221 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 SMARCB1Q12824 385 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 FXNQ16595 210 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ZNF648Q5T619 568 aaPredicted RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 ZNF549Q6P9A3 640 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 SLC46A3Q7Z3Q1 461 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 GALNT10Q86SR1 603 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 FBXL6Q8N531 539 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 PAF1Q8N7H5 531 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ZNF557Q8N988 423 aaPredicted RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 ZNF548Q8NEK5 533 aaPredicted RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 CLHC1Q8NHS4 586 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 STAG3L4Q8TBR4 150 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 NETO1Q8TDF5 533 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 COQ8BQ96D53 544 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 KCNC2Q96PR1 638 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 C17orf62Q9BQA9 187 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 IKZF5Q9H5V7 419 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 SNTG1Q9NSN8 517 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 GPR83Q9NYM4 423 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 GLTPQ9NZD2 209 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 OGDHLQ9ULD0 1010 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 PCDHB5Q9Y5E4 795 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 A3GALT2U3KPV4 340 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 SLX4Q8IY92 1834 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 FADS2P1A8MWK0 482 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ARHGAP33O14559 1287 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ANKRD28O15084 1053 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 RPL38P63173 70 aaKnown RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 BAK1Q16611 211 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 TRIM71Q2Q1W2 868 aaKnown RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 AP5B1Q2VPB7 878 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 CARD16Q5EG05 197 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 CPZQ66K79 652 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ZNF767PQ75MW2 155 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 C16orf62Q7Z3J2 963 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 GALNT7Q86SF2 657 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 TSPYL5Q86VY4 417 aaPredicted RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 OR10T2Q8NGX3 314 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 PEX13Q92968 403 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 RHBDF1Q96CC6 855 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 RNF170Q96K19 258 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 TTPALQ9BTX7 342 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 FAM83DQ9H4H8 585 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 SARS2Q9NP81 518 aaKnown RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 TREX1Q9NSU2 369 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ING3Q9NXR8 418 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 ZNF490Q9ULM2 529 aaPredicted RBP12.23□□□□□ -0.45
TSKU-203ENST00000527881 PCDHGB2Q9Y5G2 931 aa12.23□□□□□ -0.45
TSKU-203ENST00000527881 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 RGPD3A6NKT7 1758 aaPredicted RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 RGPD4Q7Z3J3 1758 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 CD3EAPO15446 510 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 PDGFAP04085 211 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 PGK2P07205 417 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 SLC2A3P11169 496 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ARF4P18085 180 aaPredicted RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 IL32P24001 234 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 RAD51Q06609 339 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 KEAP1Q14145 624 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 IRF3Q14653 427 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 PTGR1Q14914 329 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 STK11Q15831 433 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 TSTQ16762 297 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 PROX2Q3B8N5 592 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ZC3H12BQ5HYM0 836 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 GNASQ5JWF2 1037 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 OR2T5Q6IEZ7 315 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 CAPN13Q6MZZ7 669 aaPredicted RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 FAM217AQ8IXS0 508 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 OR2T29Q8NH02 315 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 PCNPQ8WW12 178 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 PHF21AQ96BD5 680 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 ULBP1Q9BZM6 244 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 TRIM45Q9H8W5 580 aaPredicted RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 EIF2B4Q9UI10 523 aaKnown RBP12.22□□□□□ -0.45
TSKU-203ENST00000527881 NUP50Q9UKX7 468 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 KCTD3Q9Y597 815 aa12.22□□□□□ -0.45
TSKU-203ENST00000527881 VTNP04004 478 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms