RNA–Protein interactions for RNA: ENST00000527827.1

CPSF1-202, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-202ENST00000527827 PCDHGA10Q9Y5H3 936 aa22.72■■□□□ 1.23
CPSF1-202ENST00000527827 LIN7AO14910 233 aaPredicted RBP22.71■■□□□ 1.23
CPSF1-202ENST00000527827 KLHL41O60662 606 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 TPH1P17752 444 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 PTPN7P35236 360 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 CACNG1Q06432 222 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 CUZD1Q86UP6 607 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 ZADH2Q8N4Q0 377 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 SLC22A11Q9NSA0 550 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 SMARCAL1Q9NZC9 954 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 OR6C2Q9NZP2 312 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 SRPK3Q9UPE1 567 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 TDRKHQ9Y2W6 561 aaKnown RBP22.71■■□□□ 1.23
CPSF1-202ENST00000527827 PCDHA3Q9Y5H8 950 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 PCDHA13Q9Y5I0 950 aa22.71■■□□□ 1.23
CPSF1-202ENST00000527827 COPG1Q9Y678 874 aaKnown RBP22.71■■□□□ 1.23
CPSF1-202ENST00000527827 BHMG1C9JSJ3 638 aaPredicted RBP22.7■■□□□ 1.22
CPSF1-202ENST00000527827 IPO13O94829 963 aaKnown RBP22.7■■□□□ 1.22
CPSF1-202ENST00000527827 CTNNA2P26232 953 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 PEBP1P30086 187 aaKnown RBP22.7■■□□□ 1.22
CPSF1-202ENST00000527827 BRD3Q15059 726 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 TLDC1Q6P9B6 456 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 TM9SF4Q92544 642 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 ELMO1Q92556 727 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 ATP13A2Q9NQ11 1180 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 TXLNGQ9NUQ3 528 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 POLG2Q9UHN1 485 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 PLAGL1Q9UM63 463 aa22.7■■□□□ 1.22
CPSF1-202ENST00000527827 LRBAP50851 2863 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 CNTRLQ7Z7A1 2325 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 SLC5A10A0PJK1 596 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 NSG1P42857 185 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 GCGRP47871 477 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 GLRBP48167 497 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 SLC5A12Q1EHB4 618 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 AADACL2Q6P093 401 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 NAPRTQ6XQN6 538 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 OR5K2Q8NHB8 316 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 STYXQ8WUJ0 223 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 PLCL2Q9UPR0 1127 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 CSAG2Q9Y5P2 127 aa22.69■■□□□ 1.22
CPSF1-202ENST00000527827 DIDO1Q9BTC0 2240 aaKnown RBP22.69■■□□□ 1.22
CPSF1-202ENST00000527827 ENO4A6NNW6 628 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 AGPSO00116 658 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 AP2A1O95782 977 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 ITGAXP20702 1163 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 PSMA3P25788 255 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 ELOAQ14241 798 aaKnown RBP22.68■■□□□ 1.22
CPSF1-202ENST00000527827 ITIH4Q14624 930 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 POU6F1Q14863 301 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 CYP2A13Q16696 494 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 TMTC1Q8IUR5 882 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 FAM20CQ8IXL6 584 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 TC2NQ8N9U0 490 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 UBE2Q2Q8WVN8 375 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 LRRC45Q96CN5 670 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 NDC1Q9BTX1 674 aa22.68■■□□□ 1.22
CPSF1-202ENST00000527827 CROCCQ5TZA2 2017 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 OR51F1A6NGY5 319 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 ISM1B1AKI9 464 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 METTL18O95568 372 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 FTH1P02794 183 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 KIR2DS3Q14952 304 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 PARP6Q2NL67 630 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 PACS1Q6VY07 963 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 SLC6A20Q9NP91 592 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 PIH1D1Q9NWS0 290 aaKnown RBP22.67■■□□□ 1.22
CPSF1-202ENST00000527827 IRAK4Q9NWZ3 460 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 EURLQ9NYK6 297 aa22.67■■□□□ 1.22
CPSF1-202ENST00000527827 CCDC78A2IDD5 438 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 MROH6A6NGR9 719 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 QSOX1O00391 747 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 ALOX12BO75342 701 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 FOXN2P32314 431 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 AIMP2Q13155 320 aaKnown RBP22.66■■□□□ 1.22
CPSF1-202ENST00000527827 TICAM1Q8IUC6 712 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 TTC13Q8NBP0 860 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 ALG3Q92685 438 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 WDR77Q9BQA1 342 aaPredicted RBP22.66■■□□□ 1.22
CPSF1-202ENST00000527827 LRRC40Q9H9A6 602 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 FBXL4Q9UKA2 621 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 KLHL20Q9Y2M5 609 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 ABCA12Q86UK0 2595 aa22.66■■□□□ 1.22
CPSF1-202ENST00000527827 RCCD1A6NED2 376 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 TJP3O95049 919 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 MAGP20916 626 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 MMP11P24347 488 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 ITGA3P26006 1051 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 MSNP26038 577 aaKnown RBP22.65■■□□□ 1.22
CPSF1-202ENST00000527827 HIF1AQ16665 826 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 ARHGEF18Q6ZSZ5 1173 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 KCNMB4Q86W47 210 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 ZGRF1Q86YA3 2104 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 LINC01555Q8NAE3 123 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 ST6GALNAC3Q8NDV1 305 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 FKBP10Q96AY3 582 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 NACC2Q96BF6 587 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 AGPAT4Q9NRZ5 378 aa22.65■■□□□ 1.22
CPSF1-202ENST00000527827 SVILO95425 2214 aa22.64■■□□□ 1.21
CPSF1-202ENST00000527827 CCDC162PA2VCL2 907 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms