RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 AIF1P55008 147 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 HDAC4P56524 1084 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 PITX1P78337 314 aaPredicted RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 HSF1Q00613 529 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 EIF4EBP2Q13542 120 aaPredicted RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 CBFBQ13951 182 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 RPS6KA1Q15418 735 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 TAF11Q15544 211 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 LEXMQ3ZCV2 418 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 KCNT1Q5JUK3 1230 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 BRMS1LQ5PSV4 323 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 STXBP5Q5T5C0 1151 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 LRRC38Q5VT99 294 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 DAB2IPQ5VWQ8 1189 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 NUGGCQ68CJ6 796 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 C11orf63Q6NUN7 778 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 PGBD2Q6P3X8 592 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 BNIPLQ7Z465 357 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 TAC4Q86UU9 113 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 NT5DC3Q86UY8 548 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 FAM131BQ86XD5 332 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 RCOR2Q8IZ40 523 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 SLC35F6Q8N357 371 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 CHCHD4Q8N4Q1 142 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 ARFGAP1Q8N6T3 406 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 UBL4BQ8N7F7 174 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 LRRC57Q8N9N7 239 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 KCTD6Q8NC69 237 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 SMRP1Q8NCR6 262 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 WDR60Q8WVS4 1066 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 GLMPQ8WWB7 406 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 ING5Q8WYH8 240 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 SMARCD2Q92925 531 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 USP13Q92995 863 aaPredicted RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 TBC1D20Q96BZ9 403 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 BTN2A3PQ96KV6 586 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 C1orf74Q96LT6 269 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 DDX50Q9BQ39 737 aaKnown RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 C1QTNF7Q9BXJ2 289 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 MAK16Q9BXY0 300 aaKnown RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 TKTL2Q9H0I9 626 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 POMKQ9H5K3 350 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 DHX35Q9H5Z1 703 aaKnown RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 ZWILCHQ9H900 591 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 ZFP14Q9HCL3 533 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 FSCN3Q9NQT6 498 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 PIGVQ9NUD9 493 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 ARHGEF38Q9NXL2 777 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 IGSF9Q9P2J2 1179 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 CDH22Q9UJ99 828 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 LSM7Q9UK45 103 aaKnown RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 ARHGAP26Q9UNA1 814 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 ZNF510Q9Y2H8 683 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 JRKLQ9Y4A0 524 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 HYOU1Q9Y4L1 999 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 CPQQ9Y646 472 aa4.51□□□□□ -1.69
USP48-211ENST00000526044 SIRT4Q9Y6E7 314 aaPredicted RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 PRRC2BQ5JSZ5 2229 aaKnown RBP4.51□□□□□ -1.69
USP48-211ENST00000526044 GOLGA6L7A0A1B0GV03 622 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CTAGE9A4FU28 777 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 C16orf96A6NNT2 1141 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 KIF2AO00139 706 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 SLC9A3R1O14745 358 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 PCDH17O14917 1159 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 PSTPIP1O43586 416 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ACSL4O60488 711 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 USP12O75317 370 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 FTCDO95954 541 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 MOCS2O96007 188 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 IGLV3-27P01718 113 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 KLKB1P03952 638 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ITGA5P08648 1049 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CD63P08962 238 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 IRF1P10914 325 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TCF4P15884 667 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 PRLRP16471 622 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 NPPBP16860 134 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CAPN3P20807 821 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 KDELR1P24390 212 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CTNNA2P26232 953 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CORO1AP31146 461 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 CASQ1P31415 396 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 CCT5P48643 541 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 VPS41P49754 854 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 PEX5P50542 639 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ALDH18A1P54886 795 aaKnown RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 RWDD2BP57060 319 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TAS2R40P59535 323 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ZXDBP98169 803 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 GAB1Q13480 694 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 PDE1CQ14123 709 aaPredicted RBP4.5□□□□□ -1.69
USP48-211ENST00000526044 KRT81Q14533 505 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 PDK2Q15119 407 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 AAK1Q2M2I8 961 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 RAB6CQ53S08 254 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 FAM78AQ5JUQ0 283 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 TANGO2Q6ICL3 276 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 ZNF425Q6IV72 752 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 LRRC31Q6UY01 552 aa4.5□□□□□ -1.69
USP48-211ENST00000526044 SYT10Q6XYQ8 523 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms