RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 CCDC69A6NI79 296 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 B3GALNT1O75752 331 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 WDPCPO95876 746 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 PTMAP06454 111 aaKnown RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 CORO1AP31146 461 aaKnown RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 SLC6A6P31641 620 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 RGS19P49795 217 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 NT5C2P49902 561 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 HTR6P50406 440 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 PGGT1BP53609 377 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 ABATP80404 500 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 EGR4Q05215 589 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 CUL3Q13618 768 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 SYT14P1Q58G82 188 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 FSCBQ5H9T9 825 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 MDH1BQ5I0G3 518 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 TCTE1Q5JU00 501 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 FNBP1LQ5T0N5 605 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 SPOUT1Q5T280 376 aaKnown RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 OTUD1Q5VV17 481 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 TYW3Q6IPR3 259 aaKnown RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 RGMBQ6NW40 437 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 BMPERQ8N8U9 685 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 LPCAT1Q8NF37 534 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 SPATA22Q8NHS9 363 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 LRRC8CQ8TDW0 803 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 BSCL2Q96G97 398 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 FAM84BQ96KN1 310 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 RAD9AQ99638 391 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 SF3B5Q9BWJ5 86 aaKnown RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 SRD5A3Q9H8P0 318 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 DNAJC11Q9NVH1 559 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 ANO10Q9NW15 660 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 HIF1ANQ9NWT6 349 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 P4HTMQ9NXG6 502 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 MTF2Q9Y483 593 aaPredicted RBP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.32□□□□□ -1.72
CSDE1-211ENST00000525970 TEX264Q9Y6I9 313 aa4.32□□□□□ -1.72
CSDE1-211ENST00000525970 A0A0A6YYC8 382 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 hDV102S1A0JD36 115 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 I3L1I5 382 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 PRPSAP2O60256 369 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 GPR137BO60478 399 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 DDHD2O94830 711 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SLC4A1P02730 911 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 IGHV4-30-4P0DP06 118 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 IL10P22301 178 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SSTR2P30874 369 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 CDX1P47902 265 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 RFX2P48378 723 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 TPD52P55327 224 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 COG7P83436 770 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 IQCCQ4KMZ1 466 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SUSD4Q5VX71 490 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 CYB5D1Q6P9G0 228 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 PODNL1Q6PEZ8 512 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 NRARPQ7Z6K4 114 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 MAP7D3Q8IWC1 876 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 C1orf87Q8N0U7 546 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 TRIML1Q8N9V2 468 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 VANGL1Q8TAA9 524 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SSMEM1Q8WWF3 244 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SYN2Q92777 582 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 PIGTQ969N2 578 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 DHX58Q96C10 678 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SGF29Q96ES7 293 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 MYADMQ96S97 322 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SLX1AQ9BQ83 275 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SLC25A33Q9BSK2 321 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 GTPBP2Q9BX10 602 aaKnown RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 OSBPL8Q9BZF1 889 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 PRMT8Q9NR22 394 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-211ENST00000525970 KLHL1Q9NR64 748 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 TMEM30AQ9NV96 361 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 SPG21Q9NZD8 308 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 TRPC4Q9UBN4 977 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 FETUBQ9UGM5 382 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 FBXL5Q9UKA1 691 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 STX8Q9UNK0 236 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 ATP6V0A2Q9Y487 856 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 YIPF1Q9Y548 306 aa4.31□□□□□ -1.72
CSDE1-211ENST00000525970 ELOVL7A1L3X0 281 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 C5orf51A6NDU8 294 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 OR5K3A6NET4 321 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 C5orf60A6NFR6 353 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 LILRA5A6NI73 299 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 SLC9B1P1A6NJY1 282 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 INAFM1C9JVW0 142 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 TMEM178BH3BS89 294 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 TTI1O43156 1089 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 PPIP5K2O43314 1243 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 PRAF2O60831 178 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 ATP6AP2O75787 350 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 PLGP00747 810 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 C8orf89P0DMQ9 161 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 CCND3P30281 292 aaPredicted RBP4.3□□□□□ -1.72
CSDE1-211ENST00000525970 MTCP1P56278 107 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 GSDMDP57764 484 aa4.3□□□□□ -1.72
CSDE1-211ENST00000525970 Q0VFX4 171 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms