RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 NOVA2Q9UNW9 492 aaKnown RBP24.97■■□□□ 1.59
PVT1-219ENST00000523427 IGLV3-16A0A075B6K0 115 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 CCDC78A2IDD5 438 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 STK10O94804 968 aaKnown RBP24.96■■□□□ 1.59
PVT1-219ENST00000523427 AIMP2Q13155 320 aaKnown RBP24.96■■□□□ 1.59
PVT1-219ENST00000523427 DENND5AQ6IQ26 1287 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 DARS2Q6PI48 645 aaKnown RBP24.96■■□□□ 1.59
PVT1-219ENST00000523427 PARP9Q8IXQ6 854 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 GRHL3Q8TE85 626 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 ELMO1Q92556 727 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 BARD1Q99728 777 aaKnown RBP24.96■■□□□ 1.59
PVT1-219ENST00000523427 SLC22A11Q9NSA0 550 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 TFR2Q9UP52 801 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 PLCL2Q9UPR0 1127 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 PRSS21Q9Y6M0 314 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 CROCCQ5TZA2 2017 aa24.96■■□□□ 1.59
PVT1-219ENST00000523427 TPBGLP0DKB5 382 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 CSE1LP55060 971 aaKnown RBP24.95■■□□□ 1.58
PVT1-219ENST00000523427 SOX8P57073 446 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 EIF3EP60228 445 aaKnown RBP24.95■■□□□ 1.58
PVT1-219ENST00000523427 CDC16Q13042 620 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 TCEAL1Q15170 157 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 DBN1Q16643 649 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 IRAK1BP1Q5VVH5 260 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 SHISA6Q6ZSJ9 500 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 TTLL10Q6ZVT0 673 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 CDKL3Q8IVW4 592 aaPredicted RBP24.95■■□□□ 1.58
PVT1-219ENST00000523427 PIANPQ8IYJ0 282 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 DNAJC22Q8N4W6 341 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 FLVCR1-AS1Q8TAF5 88 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 MARVELD3Q96A59 401 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 INTUQ9ULD6 942 aa24.95■■□□□ 1.58
PVT1-219ENST00000523427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.95■■□□□ 1.58
PVT1-219ENST00000523427 SVILO95425 2214 aa24.94■■□□□ 1.58
PVT1-219ENST00000523427 MFAP3LO75121 409 aa24.94■■□□□ 1.58
PVT1-219ENST00000523427 RBP3P10745 1247 aa24.94■■□□□ 1.58
PVT1-219ENST00000523427 C2orf73Q8N5S3 287 aaPredicted RBP24.94■■□□□ 1.58
PVT1-219ENST00000523427 LMNTD1Q8N9Z9 388 aa24.94■■□□□ 1.58
PVT1-219ENST00000523427 PIH1D1Q9NWS0 290 aaKnown RBP24.94■■□□□ 1.58
PVT1-219ENST00000523427 EURLQ9NYK6 297 aa24.94■■□□□ 1.58
PVT1-219ENST00000523427 CIDEBQ9UHD4 219 aa24.94■■□□□ 1.58
PVT1-219ENST00000523427 TRBV5-4A0A0C4DH59 114 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 LIN7AO14910 233 aaPredicted RBP24.93■■□□□ 1.58
PVT1-219ENST00000523427 CBFA2T2O43439 604 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 ZG16O60844 167 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 MAGEA1P43355 309 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 PER3P56645 1201 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 SYTL3Q4VX76 610 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 AGAP7PQ5VUJ5 663 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 PRAMEF13Q5VWM6 474 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 TBC1D21Q8IYX1 336 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 AGAP4Q96P64 663 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 OR6C2Q9NZP2 312 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 IMPACTQ9P2X3 320 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 POLG2Q9UHN1 485 aa24.93■■□□□ 1.58
PVT1-219ENST00000523427 ANKRD12Q6UB98 2062 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 PRF1P14222 555 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 MAGP20916 626 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 MMP11P24347 488 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 ACADLP28330 430 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 PEBP1P30086 187 aaKnown RBP24.92■■□□□ 1.58
PVT1-219ENST00000523427 CACNG1Q06432 222 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 NAA30Q147X3 362 aaPredicted RBP24.92■■□□□ 1.58
PVT1-219ENST00000523427 POU6F1Q14863 301 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 TAX1BP1Q86VP1 789 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 METTL27Q8N6F8 245 aaPredicted RBP24.92■■□□□ 1.58
PVT1-219ENST00000523427 PPP4R1Q8TF05 950 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 ZDHHC19Q8WVZ1 309 aaPredicted RBP24.92■■□□□ 1.58
PVT1-219ENST00000523427 LRRC45Q96CN5 670 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 CDKN2AIPNLQ96HQ2 116 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 SPATA13Q96N96 652 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 PHF12Q96QT6 1004 aa24.92■■□□□ 1.58
PVT1-219ENST00000523427 SOX17Q9H6I2 414 aaPredicted RBP24.92■■□□□ 1.58
PVT1-219ENST00000523427 NLE1Q9NVX2 485 aaPredicted RBP24.92■■□□□ 1.58
PVT1-219ENST00000523427 GRIA3P42263 894 aa24.91■■□□□ 1.58
PVT1-219ENST00000523427 LINC00696Q6ZRV3 163 aa24.91■■□□□ 1.58
PVT1-219ENST00000523427 TMTC1Q8IUR5 882 aa24.91■■□□□ 1.58
PVT1-219ENST00000523427 MCATQ8IVS2 390 aaKnown RBP24.91■■□□□ 1.58
PVT1-219ENST00000523427 SLC34A3Q8N130 599 aa24.91■■□□□ 1.58
PVT1-219ENST00000523427 ALS2CR12Q96Q35 445 aa24.91■■□□□ 1.58
PVT1-219ENST00000523427 CHRNA10Q9GZZ6 450 aa24.91■■□□□ 1.58
PVT1-219ENST00000523427 OR51F1A6NGY5 319 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 BHMG1C9JSJ3 638 aaPredicted RBP24.9■■□□□ 1.58
PVT1-219ENST00000523427 E2F3O00716 465 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 HNRNPRO43390 633 aaKnown RBP24.9■■□□□ 1.58
PVT1-219ENST00000523427 AP2A2O94973 939 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 FTH1P02794 183 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 GSTM1P09488 218 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 ITGAXP20702 1163 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 MCM3P25205 808 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 NSG1P42857 185 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 GSTM4Q03013 218 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 ZNF169Q14929 603 aaPredicted RBP24.9■■□□□ 1.58
PVT1-219ENST00000523427 ZRSR2Q15696 482 aaKnown RBP24.9■■□□□ 1.58
PVT1-219ENST00000523427 SLC5A12Q1EHB4 618 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 SP5Q6BEB4 398 aaPredicted RBP24.9■■□□□ 1.58
PVT1-219ENST00000523427 OVCH1Q7RTY7 1134 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 FJX1Q86VR8 437 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 VSTM4Q8IW00 320 aa24.9■■□□□ 1.58
PVT1-219ENST00000523427 TAB3Q8N5C8 712 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms