RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-223	ENST00000523125	SOX13	Q9UN79	622 aa		11.95	□□□□□ -0.5
VEGFA-223	ENST00000523125	NEU2	Q9Y3R4	380 aa		11.95	□□□□□ -0.5
VEGFA-223	ENST00000523125	PRRC2C	Q9Y520	2896 aa	Known RBP	11.95	□□□□□ -0.5
VEGFA-223	ENST00000523125	MDC1	Q14676	2089 aa	Known RBP	11.95	□□□□□ -0.5
VEGFA-223	ENST00000523125	SPEN	Q96T58	3664 aa	Known RBP	11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	ZNF749	O43361	778 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	VAPB	O95292	243 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	APOA4	P06727	396 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	RAB40AL	P0C0E4	278 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	NR1D1	P20393	614 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	CYP2A7	P20853	494 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	RPS3	P23396	243 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	PKLR	P30613	574 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	VPS41	P49754	854 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	RAB28	P51157	221 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	ITGA1	P56199	1179 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	GPS1	Q13098	491 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	KIR2DS3	Q14952	304 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	SLC5A12	Q1EHB4	618 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	TYSND1	Q2T9J0	566 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	PTCHD3	Q3KNS1	767 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	CTSL3P	Q5NE16	218 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	ANKRD22	Q5VYY1	191 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	PTRHD1	Q6GMV3	140 aa	Known RBP	11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	FAM198B	Q6UWH4	519 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	UNC5D	Q6UXZ4	953 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	APLF	Q8IW19	511 aa	Predicted RBP	11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	REXO1L1P	Q8IX06	675 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	FAM20C	Q8IXL6	584 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	SYTL1	Q8IYJ3	562 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	MPP5	Q8N3R9	675 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	CFAP61	Q8NHU2	1237 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	SEC14L1	Q92503	715 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	CLIP3	Q96DZ5	547 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	BIRC8	Q96P09	236 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	TSSK1B	Q9BXA7	367 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	NLN	Q9BYT8	704 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	TRIM55	Q9BYV6	548 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	SPRTN	Q9H040	489 aa	Predicted RBP	11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	CIDEB	Q9UHD4	219 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	TLK1	Q9UKI8	766 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	TP53TG5	Q9Y2B4	290 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	MAN2B2	Q9Y2E5	1009 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	JRKL	Q9Y4A0	524 aa		11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125	FLNB	O75369	2602 aa	Known RBP	11.94	□□□□□ -0.5
VEGFA-223	ENST00000523125		A0A0J9YY10	115 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	ISM1	B1AKI9	464 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	GOLGA8K	D6RF30	607 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125		E7EQ34	232 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	GOLGA8T	H3BQL2	631 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	MAP3K7	O43318	606 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	NDUFS3	O75489	264 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	RFPL1	O75677	317 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	DNAJB5	O75953	348 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	TMEM63A	O94886	807 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	KRT14	P02533	472 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	CSRP3	P50461	194 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	TERF1	P54274	439 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	EIF3B	P55884	814 aa	Known RBP	11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	KCNC4	Q03721	635 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	TLE1	Q04724	770 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	CYP1B1	Q16678	543 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	DEFB110	Q30KQ9	67 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	LACTB2	Q53H82	288 aa	Predicted RBP	11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	TCTN3	Q6NUS6	607 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	HOOK3	Q86VS8	718 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	LRRC6	Q86X45	466 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	DCUN1D3	Q8IWE4	304 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	DNAJC22	Q8N4W6	341 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	C2orf73	Q8N5S3	287 aa	Predicted RBP	11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	ENDOV	Q8N8Q3	282 aa	Known RBP	11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	THAP4	Q8WY91	577 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	LPGAT1	Q92604	370 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	MAGOHB	Q96A72	148 aa	Known RBP	11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	PBK	Q96KB5	322 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	IL17F	Q96PD4	163 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	TRIM56	Q9BRZ2	755 aa	Known RBP	11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	EPN3	Q9H201	632 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	GNPTG	Q9UJJ9	305 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	TCFL5	Q9UL49	500 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	NFS1	Q9Y697	457 aa		11.93	□□□□□ -0.5
VEGFA-223	ENST00000523125	RELN	P78509	3460 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	KRT87P	A6NCN2	255 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	MKRN2OS	H3BPM6	223 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	KPNA5	O15131	536 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	PRICKLE3	O43900	615 aa	Predicted RBP	11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	KDM1A	O60341	852 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	OR2B3	O76000	313 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	PDGFA	P04085	211 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	RPN2	P04844	631 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	HBQ1	P09105	142 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CBSL	P0DN79	551 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CD9	P21926	228 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	FMO4	P31512	558 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CBS	P35520	551 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	COIL	P38432	576 aa	Predicted RBP	11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CASR	P41180	1078 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	ADAR	P55265	1226 aa	Known RBP	11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	GBX1	Q14549	363 aa		11.92	□□□□□ -0.5
VEGFA-223	ENST00000523125	CCSMST1	Q4G0I0	132 aa		11.92	□□□□□ -0.5

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