RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 SF3B1O75533 1304 aaKnown RBP eCLIP3.24□□□□□ -1.893e-6■■■■■ 137.9
VPS13B-209ENST00000521559 A0A1B0GUV1 79 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TARSL2A2RTX5 802 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 GTPBP10A4D1E9 387 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 EPOPA6NHQ4 379 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 GOLGA6L19H0YKK7 550 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 I3L4J1 428 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CYB561D2O14569 222 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 NCAM2O15394 837 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 HUS1O60921 280 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TACC1O75410 805 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 KRT36O76013 467 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 AGR2O95994 175 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 ASS1P00966 412 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 SERPINC1P01008 464 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 IGKV3-20P01619 116 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 AFPP02771 609 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 URODP06132 367 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CSF1P09603 554 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 P4HA1P13674 534 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TYMPP19971 482 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 WARSP23381 471 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 DNAJB1P25685 340 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 PON1P27169 355 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 PIK3CAP42336 1068 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 MTNR1AP48039 350 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 LHX1P48742 406 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 FMO5P49326 533 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 MXI1P50539 228 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 ERVFC1-1P60608 527 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TNNC1P63316 161 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TPM4P67936 248 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 MYL7Q01449 175 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CAMK1Q14012 370 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 SMC1AQ14683 1233 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 AP5B1Q2VPB7 878 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 USP41Q3LFD5 358 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 FILIP1LQ4L180 1135 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CBWD6Q4V339 395 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 HSP90AA4PQ58FG1 418 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF628Q5EBL2 1059 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF667Q5HYK9 610 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CBWD3Q5JTY5 395 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CBWD5Q5RIA9 395 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 WSCD1Q658N2 575 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 WBP2NLQ6ICG8 309 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TYW3Q6IPR3 259 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 DENND1BQ6P3S1 775 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 GJB7Q6PEY0 223 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 APTXQ7Z2E3 356 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 METTL23Q86XA0 190 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CEP57Q86XR8 500 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 THEM5Q8N1Q8 247 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 GHDCQ8N2G8 530 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TMEM86AQ8N2M4 240 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 PDCL2Q8N4E4 241 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 FBXL13Q8NEE6 735 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TAS1R2Q8TE23 839 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 ATOH1Q92858 354 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 USP13Q92995 863 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 RNF183Q96D59 192 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 MRPL38Q96DV4 380 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 KLHL5Q96PQ7 755 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 PI4K2AQ9BTU6 479 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 INTS2Q9H0H0 1204 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 ZBP1Q9H171 429 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 NDST4Q9H3R1 872 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 DDX31Q9H8H2 851 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF556Q9HAH1 456 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 CYP3A43Q9HB55 503 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 APOBEC3GQ9HC16 384 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 MRPL17Q9NRX2 175 aaKnown RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 TAB2Q9NYJ8 693 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 IFT80Q9P2H3 777 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-209ENST00000521559 SNX9Q9Y5X1 595 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 HTTP42858 3142 aa3.24□□□□□ -1.89
VPS13B-209ENST00000521559 IGLV5-52A0A0A0MRZ9 124 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 A0A0U1RQJ8 604 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 HIDE1A8MVS5 230 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 STX16-NPEPL1H3BU86 382 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 PES1O00541 588 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 STX16O14662 325 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ADAM12O43184 909 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF432O94892 652 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 PPP1R3DO95685 299 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 SNRNP70P08621 437 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CNPP09543 421 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 WEE2P0C1S8 567 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ODC1P11926 461 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ATP1A3P13637 1013 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 ZNF12P17014 697 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CD53P19397 219 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CNTFP26441 200 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 GNL1P36915 607 aaPredicted RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 RPL3P39023 403 aaKnown RBP3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CLCN5P51795 746 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 CDH8P55286 799 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 UBASH3AP57075 661 aa3.23□□□□□ -1.89
VPS13B-209ENST00000521559 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms