RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ATP5DP30049 168 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 RAB28P51157 221 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.98■□□□□ 0.79
TRIM35-203ENST00000521253 ACSBG2Q5FVE4 666 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 TMTC4Q5T4D3 741 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 ZNF572Q7Z3I7 529 aaPredicted RBP19.98■□□□□ 0.79
TRIM35-203ENST00000521253 TRIM73Q86UV7 250 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 SPNS2Q8IVW8 549 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 NLGN4XQ8N0W4 816 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 BBOF1Q8ND07 529 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 NLGN4YQ8NFZ3 816 aaPredicted RBP19.98■□□□□ 0.79
TRIM35-203ENST00000521253 GIMAP7Q8NHV1 300 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 FLVCR1-AS1Q8TAF5 88 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 SNRNP27Q8WVK2 155 aaKnown RBP19.98■□□□□ 0.79
TRIM35-203ENST00000521253 KCNJ9Q92806 393 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 CERS2Q96G23 380 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 TRAPPC9Q96Q05 1148 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 OR2A14Q96R47 310 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 SLC30A3Q99726 388 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 KLHL25Q9H0H3 589 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 DPH5Q9H2P9 285 aa19.98■□□□□ 0.79
TRIM35-203ENST00000521253 KIAA0754O94854 1291 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 TIAF1O95411 115 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 C1orf105O95561 183 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 WT1P19544 449 aaPredicted RBP19.97■□□□□ 0.79
TRIM35-203ENST00000521253 PEBP1P30086 187 aaKnown RBP19.97■□□□□ 0.79
TRIM35-203ENST00000521253 BDKRB1P46663 353 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 TUBB4BP68371 445 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 TUBB2AQ13885 445 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 GPR19Q15760 415 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 CCSMST1Q4G0I0 132 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 STEAP4Q687X5 459 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 ANKMY2Q8IV38 441 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 CNTN4Q8IWV2 1026 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 LMNTD1Q8N9Z9 388 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 LINC01555Q8NAE3 123 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 FOPNLQ96NB1 174 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 IL17FQ96PD4 163 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 TUBB2BQ9BVA1 445 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 WHRNQ9P202 907 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 SLC17A6Q9P2U8 582 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 COMMD10Q9Y6G5 202 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 ATMQ13315 3056 aa19.97■□□□□ 0.79
TRIM35-203ENST00000521253 KRT87PA6NCN2 255 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 E7ESA3 106 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 NDC80O14777 642 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 RASGRF2O14827 1237 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 MATN4O95460 622 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 CD9P21926 228 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 MAP4P27816 1152 aaKnown RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 GABRB3P28472 473 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 CARSP49589 748 aaKnown RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 PDIA2Q13087 525 aaKnown RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 KIR2DS3Q14952 304 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 FASTKD3Q14CZ7 662 aaKnown RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 KLHL38Q2WGJ6 581 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 PWWP2BQ6NUJ5 590 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 TTC23LQ6PF05 361 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 TRMT10BQ6PF06 316 aaKnown RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 BPHLQ86WA6 291 aaPredicted RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 GABPB2Q8TAK5 448 aaPredicted RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 RAD51AP1Q96B01 352 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 ZNF501Q96CX3 271 aaPredicted RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 GPR21Q99679 349 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 AARSD1Q9BTE6 412 aaKnown RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 PPANQ9NQ55 473 aaKnown RBP19.96■□□□□ 0.79
TRIM35-203ENST00000521253 KLHL42Q9P2K6 505 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 LNPEPQ9UIQ6 1025 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 CDC23Q9UJX2 597 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 SLC39A10Q9ULF5 831 aa19.96■□□□□ 0.79
TRIM35-203ENST00000521253 ISM1B1AKI9 464 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 LIFP15018 202 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 CCNFP41002 786 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 CALCOCO2Q13137 446 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 CUL1Q13616 776 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 MAP7Q14244 749 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 TTLL9Q3SXZ7 439 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 DUPD1Q68J44 220 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 C6orf15Q6UXA7 325 aaPredicted RBP19.95■□□□□ 0.78
TRIM35-203ENST00000521253 KIAA0408Q6ZU52 694 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 C2orf73Q8N5S3 287 aaPredicted RBP19.95■□□□□ 0.78
TRIM35-203ENST00000521253 ESX1Q8N693 406 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 GALNT6Q8NCL4 622 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 FBXO36Q8NEA4 188 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 OR2L8Q8NGY9 312 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 CD200R1Q8TD46 325 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 FCRL4Q96PJ5 515 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 NDNQ99608 321 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 GRHL1Q9NZI5 618 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 DHRS7Q9Y394 339 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 PCDHGA4Q9Y5G9 962 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 MRFAP1Q9Y605 127 aa19.95■□□□□ 0.78
TRIM35-203ENST00000521253 A0A0J9YY10 115 aa19.94■□□□□ 0.78
TRIM35-203ENST00000521253 LOC101059948A0A1B0GTJ6 334 aa19.94■□□□□ 0.78
TRIM35-203ENST00000521253 URI1O94763 535 aaPredicted RBP19.94■□□□□ 0.78
TRIM35-203ENST00000521253 AHSGP02765 367 aa19.94■□□□□ 0.78
TRIM35-203ENST00000521253 CKAP4Q07065 602 aaKnown RBP19.94■□□□□ 0.78
TRIM35-203ENST00000521253 ABHD18Q0P651 414 aa19.94■□□□□ 0.78
TRIM35-203ENST00000521253 CBLBQ13191 982 aa19.94■□□□□ 0.78
TRIM35-203ENST00000521253 FRG1Q14331 258 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms