RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 PCDHB1Q9Y5F3 818 aa8.47□□□□□ -1.05
CTNNA1-223ENST00000520520 LAMA1P25391 3075 aa8.47□□□□□ -1.05
CTNNA1-223ENST00000520520 CACNA1BQ00975 2339 aa8.46□□□□□ -1.05
CTNNA1-223ENST00000520520 hCG_2014768A0A024R1R8 64 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 NPEPPSL1A6NEC2 478 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 OR6C75A6NL08 312 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 E5RI56 91 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 H3BMQ9 156 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 J3KR12 359 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 BTN3A1O00481 513 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 SYNCRIPO60506 623 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 LRP3O75074 770 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 SEC24DO94855 1032 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 KCNH1O95259 989 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 BCL10O95999 233 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 OTCP00480 354 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 ESR1P03372 595 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 LINC00032P0C843 101 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 PKMP14618 531 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 TSPAN8P19075 237 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 NDUFV2P19404 249 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 EEF1B2P24534 225 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 OR1E1P30953 314 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 AKT1P31749 480 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 CASP2P42575 452 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 PIK3CGP48736 1102 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 SCNN1BP51168 640 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 ZNF140P52738 457 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 CDH15P55291 814 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 OCA2Q04671 838 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 FCHO2Q0JRZ9 810 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 EFEMP1Q12805 493 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 GPR17Q13304 367 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 PWP1Q13610 501 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 RAB39AQ14964 217 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 VEPH1Q14D04 833 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 MOGQ16653 247 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 TIGD2Q4W5G0 525 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 PITRM1Q5JRX3 1037 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 DGKKQ5KSL6 1271 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 RAP1GAP2Q684P5 730 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 TCEAL6Q6IPX3 200 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 METTL2BQ6P1Q9 378 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 ZNF549Q6P9A3 640 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 KLHL35Q6PF15 583 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 C16orf87Q6PH81 154 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 TMEM207Q6UWW9 146 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 CYHR1Q6ZMK1 362 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 Q6ZNX1 250 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 LINC00299Q6ZSB3 139 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 RNF165Q6ZSG1 346 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 KCTD8Q6ZWB6 473 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 USP51Q70EK9 711 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 ITIH5Q86UX2 942 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 RALGPS2Q86X27 583 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 CLEC4FQ8N1N0 589 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 TTC30BQ8N4P2 665 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 SNX31Q8N9S9 440 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 FNDC5Q8NAU1 212 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 MINDY2Q8NBR6 621 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 GLB1L3Q8NCI6 653 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 MAGEE2Q8TD90 523 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 BPIFB1Q8TDL5 484 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 HDAC2Q92769 488 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 TCEAL3Q969E4 200 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 FBXO32Q969P5 355 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 AURKBQ96GD4 344 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 CEP295NLQ96MC4 621 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 COG8Q96MW5 612 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 HHIPQ96QV1 700 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 MGME1Q9BQP7 344 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 MAGIXQ9H6Y5 334 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 RPF2Q9H7B2 306 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 NMUR1Q9HB89 426 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 SEMA4BQ9NPR2 832 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 NDFIP2Q9NV92 336 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 CD274Q9NZQ7 290 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 MARCH2Q9P0N8 246 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 IFT80Q9P2H3 777 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 UBA2Q9UBT2 640 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 PCTPQ9UKL6 214 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 ITGB1BP2Q9UKP3 347 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 EIF3LQ9Y262 564 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 INVSQ9Y283 1065 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 SH3GLB1Q9Y371 365 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 SLC30A1Q9Y6M5 507 aa8.46□□□□□ -1.06
CTNNA1-223ENST00000520520 NUP210Q8TEM1 1887 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 OR51F1A6NGY5 319 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 H3BMM5 538 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 SLC28A1O00337 649 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 RAD51BO15315 384 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 RGS14O43566 566 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 WDR47O94967 919 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 SCELO95171 688 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 OAZ2O95190 189 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 SIX3O95343 332 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 IGLV3-27P01718 113 aa8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 HAPLN1P10915 354 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 MBL2P11226 248 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-223ENST00000520520 MTHFD2P13995 350 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms