RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 NEK1Q96PY6 1258 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PAFAH2Q99487 392 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 TRMT61BQ9BVS5 477 aaKnown RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 MXD3Q9BW11 206 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 MOV10L1Q9BXT6 1211 aaKnown RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 SEMA6AQ9H2E6 1030 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZSCAN16Q9H4T2 348 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 HHATLQ9HCP6 504 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 CHORDC1Q9UHD1 332 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 EXOC6BQ9Y2D4 811 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 WBP11Q9Y2W2 641 aaKnown RBP3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 TTLL3Q9Y4R7 772 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 MYH15Q9Y2K3 1946 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 CRYBG1Q9Y4K1 1723 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 ARHGEF10O15013 1369 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 PLEKHG1Q9ULL1 1385 aa3.12□□□□□ -1.91
HMGB1P41-201ENST00000520234 RGS12O14924 1447 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ADAMTS13Q76LX8 1427 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 CPS1P31327 1500 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 LOC102723996A0A087X1L8 192 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 GPR75-ASB3A0A0A6YYF3 556 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 SYNDIG1LA6NDD5 238 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 C5orf60A6NFR6 353 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 A8MV72 311 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 MAGEB17A8MXT2 336 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 KRT86O43790 486 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 SSX4O60224 188 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 CTSVO60911 334 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 HMMRO75330 724 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF432O94892 652 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 IGLV2-11P01706 119 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PTMAP06454 111 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 HMOX1P09601 288 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 HOXB7P09629 217 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PAX1P15863 534 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 GJA1P17302 382 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 MX1P20591 662 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ANOS1P23352 680 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 CHMLP26374 656 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 MAGEA9P43362 315 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 MAP2K1Q02750 393 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 KRT81Q14533 505 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 HSP90AB3PQ58FF7 597 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 IGSF11Q5DX21 431 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 DNAJC21Q5F1R6 531 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 C9orf50Q5SZB4 431 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 NDUFAF5Q5TEU4 345 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ADALQ6DHV7 355 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 KLC3Q6P597 504 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 TMED8Q6PL24 325 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PIWIL4Q7Z3Z4 852 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 LDB1Q86U70 411 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PRPF39Q86UA1 669 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 CUZD1Q86UP6 607 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 NR2C2APQ86WQ0 139 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PTOV1Q86YD1 416 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 GPALPP1Q8IXQ4 340 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 SCML4Q8N228 414 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 KBTBD3Q8NAB2 608 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PPFIBP2Q8ND30 876 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 RBM15BQ8NDT2 890 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 EXOC4Q96A65 974 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ERO1AQ96HE7 468 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 OXNAD1Q96HP4 312 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZNF583Q96ND8 569 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 UHRF2Q96PU4 802 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 SLX1AQ9BQ83 275 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 THUMPD2Q9BTF0 503 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 MMP28Q9H239 520 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PPIL3Q9H2H8 161 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 TCF7L2Q9NQB0 619 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ZFP57Q9NU63 452 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 CPSF2Q9P2I0 782 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 PPIEQ9UNP9 301 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 RRP15Q9Y3B9 282 aaKnown RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 V9GYY5 206 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ELP1O95163 1332 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 ACEP12821 1306 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 IGSF1Q8N6C5 1336 aa3.11□□□□□ -1.91
HMGB1P41-201ENST00000520234 OVOS2A0A0J9YW53 1432 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 OVOS2Q6IE36 1432 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 N4BP2Q86UW6 1770 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 LRRC7Q96NW7 1537 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 A0A1B0GUL7 405 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MED19A0JLT2 244 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 ERICH4A6NGS2 130 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 A6NL46 340 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 IFITM10A6NMD0 228 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 P2RY10O00398 339 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 SH2B2O14492 632 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 TO15178 435 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 XPNPEP2O43895 674 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 PRKNO60260 465 aaPredicted RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 RTN2O75298 545 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 LIPFP07098 398 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 H1F0P07305 194 aaKnown RBP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MARK3P27448 753 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MATR3P43243 847 aaKnown RBP eCLIP3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 NR2C2P49116 596 aa3.1□□□□□ -1.91
HMGB1P41-201ENST00000520234 MMP15P51511 669 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms