RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 CATSPERBQ9H7T0 1116 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CHMP1AQ9HD42 196 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCNB1IP1Q9NPC3 277 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 GSN-AS1Q9NRJ2 163 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ABCC13Q9NSE7 274 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 LYARQ9NX58 379 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 IMPAD1Q9NX62 359 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 VSX1Q9NZR4 365 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 COX16Q9P0S2 106 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 SH3BP4Q9P0V3 963 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 DNMT3BQ9UBC3 853 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MORF4L1Q9UBU8 362 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CTSFQ9UBX1 484 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ACSL6Q9UKU0 697 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ELF5Q9UKW6 265 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 COG5Q9UP83 839 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 RUVBL1Q9Y265 456 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 RPH3AQ9Y2J0 694 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 TBX22Q9Y458 520 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALG6Q9Y672 507 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDY1Q9Y6F8 540 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 V9GYQ6 96 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MROH2AA6NES4 1674 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 KIF1BO60333 1816 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAP2P11137 1827 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATAD5Q96QE3 1844 aa4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 EDC4Q6P2E9 1401 aaKnown RBP4.72□□□□□ -1.65
HMGB1P19-201ENST00000517578 MYH14Q7Z406 1995 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PPLO60437 1756 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 HEG1Q9ULI3 1381 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A0G2JMP0 313 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A1W2PQ45 241 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 A0A1W2PQY0 241 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MEIOCA2RUB1 952 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 C7orf72A4D263 438 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 AQP12BA6NM10 295 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CLDN24A6NM45 220 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ZNF99A8MXY4 864 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 LINC00587B1AMM8 73 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FPGTO14772 594 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PHYHO14832 338 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FGF10O15520 208 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PROM1O43490 865 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 KLRC4O43908 158 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PIP5K1CO60331 668 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 BANF1O75531 89 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SUPT7LO94864 414 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 TOP3BO95985 862 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLGP00747 810 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GH2P01242 217 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 IFNA10P01566 189 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OPN1LWP04000 364 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OPN1MWP04001 364 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ALPPP05187 535 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 URODP06132 367 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PFKMP08237 780 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 INHBAP08476 426 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FBP1P09467 338 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 WEE2P0C1S8 567 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OPN1MW2P0DN77 364 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 OPN1MW3P0DN78 364 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 UMPSP11172 480 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 ITGAMP11215 1152 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 LCP1P13796 627 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 HNRNPLP14866 589 aaKnown RBP eCLIP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SPI1P17947 270 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MSH3P20585 1137 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CPN2P22792 545 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 FASP25445 335 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CNTFP26441 200 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 L1CAMP32004 1257 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CRHR1P34998 444 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 RPL35P42766 123 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SLC1A3P43003 542 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 KCNJ5P48544 419 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 KLK7P49862 253 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SEPHS1P49903 392 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 RIDAP52758 137 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PLA2G16P53816 162 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CACNB3P54284 484 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GALCP54803 685 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CDH15P55291 814 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 JAM2P57087 298 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PSME3P61289 254 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NOMO3P69849 1222 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPC5P78333 572 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 IFITM3Q01628 133 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 SCN1BQ07699 218 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PDIA2Q13087 525 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PRKG2Q13237 762 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 GPR50Q13585 617 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 CUL2Q13617 745 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NFYCQ13952 458 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 EFR3AQ14156 821 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 HNF4GQ14541 408 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NOMO1Q15155 1222 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 PUM3Q15397 648 aaKnown RBP4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 MAPK11Q15759 364 aa4.71□□□□□ -1.66
HMGB1P19-201ENST00000517578 NRF1Q16656 503 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms