RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 LYVE1Q9Y5Y7 322 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SESN1Q9Y6P5 492 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 FAM47E-STBD1D6RA91 191 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DFNA5O60443 496 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GABBR2O75899 941 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 C9P02748 559 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 COL6A1P12109 1028 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GPR15P49685 360 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CLCNKBP51801 687 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GNG2P59768 71 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SRSF11Q05519 484 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CDH18Q13634 790 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 VEPH1Q14D04 833 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 TLK2Q86UE8 772 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 FUNDC1Q8IVP5 155 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CYP4Z2PQ8N1L4 340 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 OR4F6Q8NGB9 312 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GPR78Q96P69 363 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CITED4Q96RK1 184 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 C11orf84Q9BUA3 381 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 TRIT1Q9H3H1 467 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CRTAC1Q9NQ79 661 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ING4Q9UNL4 249 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SLC27A5Q9Y2P5 690 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 TESMINQ9Y4I5 508 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 A0A1B0GW55 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 MAGEB17A8MXT2 336 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 HAT1O14929 419 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 FFAR2O15552 330 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DUX4L2P0CJ85 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DUX4L3P0CJ86 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DUX4L4P0CJ87 422 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DUX4L5P0CJ88 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DUX4L6P0CJ89 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DUX4L7P0CJ90 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CD247P20963 164 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 FUT4P22083 530 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 RORCP51449 518 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ZNF789Q5FWF6 425 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SPANXN4Q5MJ08 99 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SPOUT1Q5T280 376 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CES5AQ6NT32 575 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ENPP6Q6UWR7 440 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GOLGA7Q7Z5G4 137 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ANKRD46Q86W74 232 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 EPHX4Q8IUS5 362 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 PEX5LQ8IYB4 626 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 PTERQ96BW5 349 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 REPS1Q96D71 796 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ANAPC16Q96DE5 110 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 VMP1Q96GC9 406 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 UBXN10Q96LJ8 280 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 APOLD1Q96LR9 279 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 TINF2Q9BSI4 451 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GORASP2Q9H8Y8 452 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 MARCH4Q9P2E8 410 aaPredicted RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GMPR2Q9P2T1 348 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DUX4Q9UBX2 424 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ANGPT4Q9Y264 503 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 TLR6Q9Y2C9 796 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 HS3ST4Q9Y661 456 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 THSD7AQ9UPZ6 1657 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 MYH9P35579 1960 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 J3KR12 359 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ARNTLO00327 626 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 NIPSNAP2O75323 286 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 RETP07949 1114 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 HTR1BP28222 390 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DCTP40126 519 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 BRCC3P46736 316 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CXCR4P61073 352 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 MRPS6P82932 125 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 ANGPT1Q15389 498 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 TEAD4Q15561 434 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 USP39Q53GS9 565 aaKnown RBP6.53□□□□□ -1.36
CPNE3-203ENST00000517490 LCN1P1Q5VSP4 162 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 BEND5Q7L4P6 421 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CDH24Q86UP0 819 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 GALNT13Q8IUC8 556 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 SLC34A3Q8N130 599 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CARNMT1Q8N4J0 409 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DPP10Q8N608 796 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 C11orf65Q8NCR3 313 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 RHOXF1Q8NHV9 184 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 PIH1D2Q8WWB5 315 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 DIRAS2Q96HU8 199 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 EXOC2Q96KP1 924 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CYP2S1Q96SQ9 504 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 FKBPLQ9UIM3 349 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 STOML2Q9UJZ1 356 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 RAI2Q9Y5P3 530 aa6.53□□□□□ -1.36
CPNE3-203ENST00000517490 CCL15-CCL14A0A0B4J2E2 113 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PRR23D1E9PI22 279 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 INSIG1O15503 277 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 KPNA6O60684 536 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 SLITRK5O94991 958 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 EGFRP00533 1210 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 PRR23D2P0DMB1 279 aaPredicted RBP6.52□□□□□ -1.37
CPNE3-203ENST00000517490 AGXTP21549 392 aa6.52□□□□□ -1.37
CPNE3-203ENST00000517490 THPOP40225 353 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms