RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 ANKRD28O15084 1053 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 TO15178 435 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 VILLO15195 856 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MAGEB2O15479 319 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 PRPF3O43395 683 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 FRS3O43559 492 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MGEA5O60502 916 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SEC14L2O76054 403 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SNUPNO95149 360 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 NXPH4O95158 308 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 KCNK5O95279 499 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SEMA4FO95754 770 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SERPINC1P01008 464 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 CSF1P09603 554 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 ETFAP13804 333 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SLC2A4P14672 509 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 LGALS3P17931 250 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MAGP20916 626 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 AGAP20933 346 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 CCNE1P24864 410 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 LMO2P25791 158 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 EPHA8P29322 1005 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 GJC1P36383 396 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 RECQLP46063 649 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 RPL21P46778 160 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MEOX2P50222 304 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SUCLG1P53597 346 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MVDP53602 400 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 NR1H2P55055 460 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 CD81P60033 236 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 YWHAZP63104 245 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SORDQ00796 357 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 PRKAA1Q13131 559 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MFAP5Q13361 173 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 ORC2Q13416 577 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 BYSLQ13895 437 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SQLEQ14534 574 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 VEPH1Q14D04 833 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZNF146Q15072 292 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 RPS6KA1Q15418 735 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SIX1Q15475 284 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 GRAMD1BQ3KR37 738 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 GALNTL6Q49A17 601 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SPECC1Q5M775 1068 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 FBXO47Q5MNV8 452 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 OTPQ5XKR4 325 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 C18orf63Q68DL7 685 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 LIN54Q6MZP7 749 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 RINT1Q6NUQ1 792 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SLC25A47Q6Q0C1 308 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 IL20RBQ6UXL0 311 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 C14orf37Q86TY3 774 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 TGIF2LYQ8IUE0 185 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 ERI1Q8IV48 349 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SPATA6LQ8N4H0 392 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZBTB2Q8N680 514 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 C14orf178Q8N769 122 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 OR6T1Q8NGN1 323 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 OR1J1Q8NGS3 322 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 C9orf43Q8TAL5 461 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 GATAD1Q8WUU5 269 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 CHAC2Q8WUX2 184 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MARC2Q969Z3 335 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 FBXL8Q96CD0 374 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 HSPBAP1Q96EW2 488 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MYADMQ96S97 322 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 PLEKHF1Q96S99 279 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SMAD5Q99717 465 aaKnown RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MXRA8Q9BRK3 442 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SARGQ9BW04 601 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 CTDSP1Q9GZU7 261 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 BRD8Q9H0E9 1235 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 LMAN2LQ9H0V9 348 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 THAP2Q9H0W7 228 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SP140LQ9H930 580 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 A4GALTQ9NPC4 353 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 MAN2C1Q9NTJ4 1040 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 THAP1Q9NVV9 213 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 SLC52A1Q9NWF4 448 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 RGL1Q9NZL6 768 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 DHRS4-AS1Q9P1J3 65 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 KIF17Q9P2E2 1029 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 EPS15L1Q9UBC2 864 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 FBXO9Q9UK97 447 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 BAG5Q9UL15 447 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 NFU1Q9UMS0 254 aa-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 DMBT1Q9UGM3 2413 aaPredicted RBP-0.36□□□□□ -2.47
SNORA40.17-201ENST00000517256 FRAS1Q86XX4 4008 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ARHGAP21Q5T5U3 1957 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 COL6A6A6NMZ7 2263 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 TRAV9-2A0A087WT02 112 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 TRBV6-6A0A0A6YYG2 114 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 IGHV3-20A0A0C4DH32 117 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 A0A1B0GW55 424 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 MED19A0JLT2 244 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 IGKV2-29A2NJV5 120 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 PABPN1LA6NDY0 278 aaKnown RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 ZSCAN5CA6NGD5 496 aaPredicted RBP-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 TEX22C9J3V5 150 aa-0.37□□□□□ -2.47
SNORA40.17-201ENST00000517256 NPIPB9F8W1W9 429 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms