RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 PATL1Q86TB9 770 aaKnown RBP14.51□□□□□ -0.09
NUP54-217ENST00000514987 HCAR2Q8TDS4 363 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 OTUB2Q96DC9 234 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 ITCHQ96J02 903 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 RDH12Q96NR8 316 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 OR52E6Q96RD3 313 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 HEPHQ9BQS7 1158 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 THUMPD3Q9BV44 507 aaKnown RBP14.51□□□□□ -0.09
NUP54-217ENST00000514987 KCNH6Q9H252 994 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 FAM83DQ9H4H8 585 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 FARSBQ9NSD9 589 aaKnown RBP14.51□□□□□ -0.09
NUP54-217ENST00000514987 DNAJC11Q9NVH1 559 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 MAN2B2Q9Y2E5 1009 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 FADS3Q9Y5Q0 445 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 HTTP42858 3142 aa14.51□□□□□ -0.09
NUP54-217ENST00000514987 A0A096LPI6 279 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 TSPAN11A1L157 253 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 ELOVL7A1L3X0 281 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 TRIM64A6NGJ6 449 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 NEDD8-MDP1E9PL57 170 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 EI24O14681 340 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 KIAA0355O15063 1070 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 CCL16O15467 120 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 DFNA5O60443 496 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 HPRP00739 348 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 S100A3P33764 101 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 VASPP50552 380 aaPredicted RBP14.5□□□□□ -0.09
NUP54-217ENST00000514987 HSPA14Q0VDF9 509 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 RBBP5Q15291 538 aaKnown RBP14.5□□□□□ -0.09
NUP54-217ENST00000514987 TMEM259Q4ZIN3 620 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 KIAA0907Q7Z7F0 614 aaPredicted RBP14.5□□□□□ -0.09
NUP54-217ENST00000514987 TMEM132CQ8N3T6 1108 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 ZFP28Q8NHY6 868 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 ADAMTS16Q8TE57 1224 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 ASZ1Q8WWH4 475 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 SELENOMQ8WWX9 145 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 TESCQ96BS2 214 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 NMD3Q96D46 503 aaKnown RBP14.5□□□□□ -0.09
NUP54-217ENST00000514987 LRIG1Q96JA1 1093 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 VPS50Q96JG6 964 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 SEPHS2Q99611 448 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 MAGIXQ9H6Y5 334 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 ZFP14Q9HCL3 533 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 SPHK2Q9NRA0 654 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 TDP1Q9NUW8 608 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 VAPAQ9P0L0 249 aa14.5□□□□□ -0.09
NUP54-217ENST00000514987 KCNE1BA0A087WTH5 132 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 PRMT3O60678 531 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 PDYNP01213 254 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 RETP07949 1114 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 TCF3P15923 654 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 IL1RNP18510 177 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 POLR2EP19388 210 aaKnown RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 HTRA4P83105 476 aaPredicted RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 EPS8Q12929 822 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 SELPLGQ14242 412 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 CPSF6Q16630 551 aaKnown RBP eCLIP14.49□□□□□ -0.09
NUP54-217ENST00000514987 DPY19L1Q2PZI1 675 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 SPANXN4Q5MJ08 99 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 LRIF1Q5T3J3 769 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 LIPJQ5W064 366 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 ASTLQ6HA08 431 aaPredicted RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 RASGRP3Q8IV61 690 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 TRAM1L1Q8N609 369 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 KLHL23Q8NBE8 558 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 ZNF548Q8NEK5 533 aaPredicted RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 OR2A12Q8NGT7 310 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 SKA2Q8WVK7 121 aaPredicted RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 CYGBQ8WWM9 190 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 ATL1Q8WXF7 558 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 CLP1Q92989 425 aaKnown RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 SDCCAG3Q96C92 435 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 FBXL8Q96CD0 374 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 METTL2AQ96IZ6 378 aaKnown RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 FAM83CQ9BQN1 747 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 ZSCAN5AQ9BUG6 496 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 ACPTQ9BZG2 426 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 SMG9Q9H0W8 520 aaKnown RBP14.49□□□□□ -0.09
NUP54-217ENST00000514987 DNAJB9Q9UBS3 223 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 SLCO3A1Q9UIG8 710 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 ERVW-1Q9UQF0 538 aa14.49□□□□□ -0.09
NUP54-217ENST00000514987 TRBV5-3A0A0A0MS03 114 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 EME2A4GXA9 379 aaPredicted RBP14.48□□□□□ -0.09
NUP54-217ENST00000514987 C16orf96A6NNT2 1141 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 FAM220BPB1ANY3 271 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 PLOD2O00469 737 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 SLC9A3R1O14745 358 aaPredicted RBP14.48□□□□□ -0.09
NUP54-217ENST00000514987 ALBP02768 609 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 TYRP14679 529 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 EPORP19235 508 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 TTKP33981 857 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 ALDH3A2P51648 485 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 CSTF3Q12996 717 aaKnown RBP14.48□□□□□ -0.09
NUP54-217ENST00000514987 MYBPC3Q14896 1274 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 PTCHD3Q3KNS1 767 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 MBOAT1Q6ZNC8 495 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 Q6ZVU0 165 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 NECAB2Q7Z6G3 386 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 ADIPOR2Q86V24 386 aa14.48□□□□□ -0.09
NUP54-217ENST00000514987 RAVER1Q8IY67 606 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms