RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 UBXN4Q92575 508 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 FGF11Q92914 225 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 ELMO2Q96JJ3 720 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 TAAR9Q96RI9 348 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 CD180Q99467 661 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 FMO2Q99518 471 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 OLFM1Q99784 485 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 TSPYL1Q9H0U9 437 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 SPHK1Q9NYA1 384 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 OR6C2Q9NZP2 312 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 SEMA5BQ9P283 1151 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 POMT2Q9UKY4 750 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 SLC39A10Q9ULF5 831 aa13.52□□□□□ -0.25
USP46-209ENST00000514536 PIPSLA2A3N6 862 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 TLCD2A6NGC4 264 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 B4E171 279 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 MATN2O00339 956 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 C1QAP02745 245 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 ENO3P13929 434 aaPredicted RBP13.51□□□□□ -0.25
USP46-209ENST00000514536 CD9P21926 228 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 CDH3P22223 829 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 FDXRP22570 491 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 TSPAN7P41732 249 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 RAB28P51157 221 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 SH3BP2P78314 561 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 MC2RQ01718 297 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 PDAP1Q13442 181 aaKnown RBP13.51□□□□□ -0.25
USP46-209ENST00000514536 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 PIWIL4Q7Z3Z4 852 aaKnown RBP13.51□□□□□ -0.25
USP46-209ENST00000514536 PPM1NQ8N819 430 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 MAGEC3Q8TD91 643 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 OR2A14Q96R47 310 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 CTRCQ99895 268 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 MENTQ9BUN1 341 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 RHOJQ9H4E5 214 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 TXNDC16Q9P2K2 825 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 NFU1Q9UMS0 254 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 RAXQ9Y2V3 346 aa13.51□□□□□ -0.25
USP46-209ENST00000514536 FAM95CA0A1B0GW59 222 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 SLC9B1P1A6NJY1 282 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 SRRM3A6NNA2 597 aaPredicted RBP13.5□□□□□ -0.25
USP46-209ENST00000514536 ARHGEF33A8MVX0 844 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 ISM1B1AKI9 464 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 C9orf172C9J069 976 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 RASGRF2O14827 1237 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 NVLO15381 856 aaKnown RBP13.5□□□□□ -0.25
USP46-209ENST00000514536 PRAMEF10O60809 474 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 PSIP1O75475 530 aaKnown RBP13.5□□□□□ -0.25
USP46-209ENST00000514536 SPAG6O75602 509 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
USP46-209ENST00000514536 NELFEP18615 380 aaKnown RBP13.5□□□□□ -0.25
USP46-209ENST00000514536 STX2P32856 288 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 ARL4DP49703 201 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 RGS4P49798 205 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 FOXM1Q08050 763 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 TEX35Q5T0J7 233 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 TMEM164Q5U3C3 297 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 CLEC14AQ86T13 490 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 RELL1Q8IUW5 271 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 ASB11Q8WXH4 323 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 PMEPA1Q969W9 287 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 SLC41A2Q96JW4 573 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 CPNE1Q99829 537 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 MCMBPQ9BTE3 642 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 KLHL25Q9H0H3 589 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 FBXO8Q9NRD0 319 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 C1GALT1Q9NS00 363 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 NINJ2Q9NZG7 142 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 MTO1Q9Y2Z2 717 aaKnown RBP13.5□□□□□ -0.25
USP46-209ENST00000514536 PCDHGA7Q9Y5G6 932 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 B3GALT1Q9Y5Z6 326 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 DMXL2Q8TDJ6 3036 aa13.5□□□□□ -0.25
USP46-209ENST00000514536 GFYI3L273 518 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 EIF3FO00303 357 aaPredicted RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 FAM155BO75949 473 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 UGT2B7P16662 529 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 GP5P40197 560 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 TAS2R39P59534 338 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 IL2P60568 153 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 HSD11B2P80365 405 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 KCNAB1Q14722 419 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 EFTUD2Q15029 972 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP46-209ENST00000514536 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 UBAP2Q5T6F2 1119 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 ANKS6Q68DC2 871 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 SPESP1Q6UW49 350 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 TMEM207Q6UWW9 146 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 TRIM73Q86UV7 250 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 TAX1BP1Q86VP1 789 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 KMT5CQ86Y97 462 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 LINC01555Q8NAE3 123 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 OR9A1PQ8NGU1 263 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 OR2L8Q8NGY9 312 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 DENND1AQ8TEH3 1009 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 LINGO1Q96FE5 620 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
USP46-209ENST00000514536 VPS39Q96JC1 886 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 OR6C1Q96RD1 312 aa13.49□□□□□ -0.25
USP46-209ENST00000514536 APMAPQ9HDC9 416 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms