RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 GJC1P36383 396 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 UBASH3AP57075 661 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 PMP22Q01453 160 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 PPIDQ08752 370 aaKnown RBP10.73□□□□□ -0.69
RNF4-218ENST00000513284 PRKG2Q13237 762 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 IQCB1Q15051 598 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 INAQ16352 499 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 SLC5A12Q1EHB4 618 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 LONRF2Q1L5Z9 754 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 BCL7AQ4VC05 210 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 ODF2Q5BJF6 829 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 IRAK1BP1Q5VVH5 260 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 ATG9BQ674R7 924 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 FAAH2Q6GMR7 532 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 Q6ZPB1 254 aaPredicted RBP10.73□□□□□ -0.69
RNF4-218ENST00000513284 H2AFVQ71UI9 128 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 ZNF398Q8TD17 642 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.73□□□□□ -0.69
RNF4-218ENST00000513284 CTNNBL1Q8WYA6 563 aaPredicted RBP10.73□□□□□ -0.69
RNF4-218ENST00000513284 FKBP10Q96AY3 582 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 FAF2Q96CS3 445 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 NAP1L5Q96NT1 182 aaPredicted RBP10.73□□□□□ -0.69
RNF4-218ENST00000513284 SRPK1Q96SB4 655 aaKnown RBP10.73□□□□□ -0.69
RNF4-218ENST00000513284 ZNF160Q9HCG1 818 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 TXLNGQ9NUQ3 528 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 SMOXQ9NWM0 555 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 UBP1Q9NZI7 540 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 CTTNBP2NLQ9P2B4 639 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 CTSFQ9UBX1 484 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 ICKQ9UPZ9 632 aa10.73□□□□□ -0.69
RNF4-218ENST00000513284 LUC7L2Q9Y383 392 aaKnown RBP10.73□□□□□ -0.69
RNF4-218ENST00000513284 GLYATL1P3A0A0U1RQE8 302 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 C17orf113A0A1B0GUU1 675 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 ADAM10O14672 748 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 PMPCBO75439 489 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 RASAL1O95294 804 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 WDPCPO95876 746 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 HPP00738 406 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 CELA2AP08217 269 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 ESRRAP11474 423 aaPredicted RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 MSH3P20585 1137 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 SPAM1P38567 509 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 CHRNA4P43681 627 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 TNNT3P45378 269 aaPredicted RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 BOP1Q14137 746 aaKnown RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 PPP2R5EQ16537 467 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 CCDC70Q6NSX1 233 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 UNC5AQ6ZN44 842 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 TTLL10Q6ZVT0 673 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 BRIX1Q8TDN6 353 aaKnown RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 N4BP2L2Q92802 583 aaPredicted RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 C8orf44Q96CB5 159 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 RBM41Q96IZ5 413 aaKnown RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 CCM2Q9BSQ5 444 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 MAK16Q9BXY0 300 aaKnown RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 ZCCHC2Q9C0B9 1178 aaKnown RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 EURLQ9NYK6 297 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 HEBP2Q9Y5Z4 205 aa10.72□□□□□ -0.69
RNF4-218ENST00000513284 SNRNP200O75643 2136 aaKnown RBP10.72□□□□□ -0.69
RNF4-218ENST00000513284 A0A087X0T9 212 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 DYTNA2CJ06 578 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 PROSCO94903 275 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 MED26O95402 600 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 CRYABP02511 175 aaKnown RBP10.71□□□□□ -0.69
RNF4-218ENST00000513284 FAM228BP0C875 321 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 PRR35P0CG20 571 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 ZFXP17010 805 aaPredicted RBP10.71□□□□□ -0.69
RNF4-218ENST00000513284 PEBP1P30086 187 aaKnown RBP10.71□□□□□ -0.69
RNF4-218ENST00000513284 OR1D4P47884 311 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 FANCCQ00597 558 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 SLC14A2Q15849 920 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 RBBP7Q16576 425 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 LONRF1Q17RB8 773 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 SIRPB2Q5JXA9 342 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 KDELC1Q6UW63 502 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 MICALCLQ6ZW33 695 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 LAPTM4BQ86VI4 370 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 SPPL2CQ8IUH8 684 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 CHERPQ8IWX8 916 aaKnown RBP10.71□□□□□ -0.69
RNF4-218ENST00000513284 SIRT6Q8N6T7 355 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 NANOS1Q8WY41 292 aaKnown RBP10.71□□□□□ -0.69
RNF4-218ENST00000513284 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■■■■■ 54.9
RNF4-218ENST00000513284 FOXC2Q99958 501 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 MRM3Q9HC36 420 aaKnown RBP10.71□□□□□ -0.69
RNF4-218ENST00000513284 GLOD4Q9HC38 313 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.71□□□□□ -0.69
RNF4-218ENST00000513284 CAPN11Q9UMQ6 739 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 PLCL2Q9UPR0 1127 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 KLHL20Q9Y2M5 609 aa10.71□□□□□ -0.69
RNF4-218ENST00000513284 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.71□□□□□ -0.69
RNF4-218ENST00000513284 FBN1P35555 2871 aaKnown RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 A0A1B0GX78 115 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 KLHL33A6NCF5 533 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 AGAP14A8MT82 685 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 PPP1R12AO14974 1030 aaPredicted RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 DRD2P14416 443 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 MCM3P25205 808 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 AKT1P31749 480 aa10.7□□□□□ -0.7
RNF4-218ENST00000513284 CD68P34810 354 aaPredicted RBP10.7□□□□□ -0.7
RNF4-218ENST00000513284 TAS2R40P59535 323 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms