RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 SLC39A11Q8N1S5 342 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PDPRQ8NCN5 879 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR2T34Q8NGX1 318 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR4C6Q8NH72 309 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 BAP1Q92560 729 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ART4Q93070 314 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 MOAP1Q96BY2 351 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 COMMD9Q9P000 198 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PRPF19Q9UMS4 504 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 GNEQ9Y223 722 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 COL2A1P02458 1487 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 CIB4A0PJX0 185 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 UBE2QL1A1L167 161 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PIRO00625 290 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SNAP91O60641 907 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 P04436 131 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ERFP50548 548 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 KCNQ1P51787 676 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CDH13P55290 713 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 RAB25P57735 213 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR4D2P58180 307 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SMCO1Q147U7 214 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 MZT2BQ6NZ67 158 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HSDL2Q6YN16 418 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ZCCHC23Q6ZST2 131 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CENPSQ8N2Z9 138 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR4C15Q8NGM1 316 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR6N1Q8NGY5 312 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 VANGL1Q8TAA9 524 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 IPCEF1Q8WWN9 437 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 RFKQ969G6 155 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TESCQ96BS2 214 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TMCO6Q96DC7 493 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SLC29A3Q9BZD2 475 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 GRIP2Q9C0E4 1043 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ACP6Q9NPH0 428 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ZNF180Q9UJW8 692 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 A0A1W2PRB8 838 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SH3PXD2BA1X283 911 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HYKKA2RU49 373 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 H3BQ06 376 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 COCHO43405 550 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ERI3O43414 337 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 KIF1CO43896 1103 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 PCDH7O60245 1069 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PRAMEF11O60813 436 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ABCB7O75027 752 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 FHP07954 510 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 FAM58BPP0C7Q3 252 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TYRP1P17643 537 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 RYKP34925 604 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 NCBP2P52298 156 aaKnown RBP eCLIP4.16□□□□□ -1.74
VCAN-209ENST00000513016 UPP1Q16831 310 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TMEM198Q66K66 360 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ZYG11AQ6WRX3 759 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 NIPA2Q8N8Q9 360 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 VN1R2Q8NFZ6 395 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR2T12Q8NG77 320 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SLC13A3Q8WWT9 602 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SGIP1Q9BQI5 828 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SPATA7Q9P0W8 599 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HAS3O00219 553 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SLC16A5O15375 505 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 MPZL2O60487 215 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 BCAS2O75934 225 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 PRAMEF12O95522 483 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PAK4O96013 591 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 EPOP01588 193 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 THEGLP0DJG4 465 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HLA-EP13747 358 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 EDNRBP24530 442 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CRHR1P34998 444 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CDKN2BP42772 138 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 DGUOKQ16854 277 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.16□□□□□ -1.74
VCAN-209ENST00000513016 PTCHD4Q6ZW05 846 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 LINC00471Q8N535 108 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CPSF7Q8N684 471 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR56A1Q8NGH5 318 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR10Q1Q8NGQ4 319 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HAVCR1Q96D42 359 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 FARSBQ9NSD9 589 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 C14orf105Q9NVL8 296 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 MRPL39Q9NYK5 338 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 B4GALT6Q9UBX8 382 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 POU2F3Q9UKI9 436 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HS3ST4Q9Y661 456 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SOBPA7XYQ1 873 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TGM5O43548 720 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CST1P01037 141 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 IFNA6P05013 189 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 POLR2CP19387 275 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 TTKP33981 857 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 POLR2JP52435 117 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 RPS14P62263 151 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 CYP4F3Q08477 520 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 FCHO2Q0JRZ9 810 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HSPB3Q12988 150 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TRAF3Q13114 568 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 RIN1Q13671 783 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms