RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	TAPBP	O15533	448 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	PRICKLE3	O43900	615 aa	Predicted RBP	14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	KCNK5	O95279	499 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	MT-ND3	P03897	115 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	MPO	P05164	745 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	ERG	P11308	486 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	MTHFD2	P13995	350 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	SLC2A4	P14672	509 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	MPST	P25325	297 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	RGS4	P49798	205 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	PDX1	P52945	283 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	GFER	P55789	205 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	SLC18A2	Q05940	514 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	INAVA	Q3KP66	663 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	AMZ1	Q400G9	498 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	TECRL	Q5HYJ1	363 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	EXOC3L1	Q86VI1	746 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	TAX1BP1	Q86VP1	789 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	DCUN1D3	Q8IWE4	304 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	ZNF480	Q8WV37	535 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	KIAA1191	Q96A73	305 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	MTBP	Q96DY7	904 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	SLC38A3	Q99624	504 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	TFB2M	Q9H5Q4	396 aa	Known RBP	14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	TMBIM4	Q9HC24	238 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	EVA1B	Q9NVM1	165 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	DLL3	Q9NYJ7	618 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	CDV3	Q9UKY7	258 aa	Known RBP	14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	SH2B3	Q9UQQ2	575 aa		14.11	□□□□□ -0.15
MATR3-238	ENST00000512107	ADAMTS20	P59510	1910 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	OR6C74	A6NCV1	312 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	TARM1	B6A8C7	271 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	UBXN8	O00124	270 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	SLC16A5	O15375	505 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	KIF1C	O43896	1103 aa	Known RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	PRAMEF10	O60809	474 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	SPAG7	O75391	227 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	GUCA1C	O95843	209 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	SYF2	O95926	243 aa	Known RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	RPLP0	P05388	317 aa	Known RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	C8G	P07360	202 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	FTH1P19	P0C7X4	201 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	PNLIP	P16233	465 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	KRT15	P19012	456 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	POLR2C	P19387	275 aa	Predicted RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	PSMB5	P28074	263 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	IMPA1	P29218	277 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	NOVA1	P51513	510 aa	Known RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	INSM1	Q01101	510 aa	Predicted RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	LRRC8E	Q6NSJ5	796 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	TAOK1	Q7L7X3	1001 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	B3GNT8	Q7Z7M8	397 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	FBXO15	Q8NCQ5	510 aa	Predicted RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	OR9A1P	Q8NGU1	263 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	EXT2	Q93063	718 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	ESAM	Q96AP7	390 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	MOCOS	Q96EN8	888 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	CDC6	Q99741	560 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	TMEM79	Q9BSE2	394 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	ABCG4	Q9H172	646 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	LRRN3	Q9H3W5	708 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	PPCS	Q9HAB8	311 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	RDH14	Q9HBH5	336 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	PARVB	Q9HBI1	364 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	ACSS2	Q9NR19	701 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	KCNK4	Q9NYG8	393 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	STOX2	Q9P2F5	926 aa	Predicted RBP	14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	TLK1	Q9UKI8	766 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	HEBP2	Q9Y5Z4	205 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	COLEC10	Q9Y6Z7	277 aa		14.1	□□□□□ -0.15
MATR3-238	ENST00000512107	UNC13C	Q8NB66	2214 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	NCF1B	A6NI72	391 aa	Predicted RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	NCF1C	A8MVU1	366 aa	Predicted RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	TK2	O00142	265 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	OPA1	O60313	960 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	NRP2	O60462	931 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	UBXN7	O94888	489 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	SLC16A8	O95907	504 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	CAT	P04040	527 aa	Known RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	PROS1	P07225	676 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	NCF1	P14598	390 aa	Predicted RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	KRT4	P19013	534 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	RPIA	P49247	311 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	KPNA2	P52292	529 aa	Known RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	SIM1	P81133	766 aa	Predicted RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	ILF2	Q12905	390 aa	Known RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	MPP2	Q14168	576 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	KRT33B	Q14525	404 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	CYP2A13	Q16696	494 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	TAF1B	Q53T94	588 aa	Predicted RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	TTMP	Q5BVD1	217 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	LGSN	Q5TDP6	509 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	SUSD1	Q6UWL2	747 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	DHRS13	Q6UX07	377 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	TBC1D1	Q86TI0	1168 aa	Predicted RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	TRIM73	Q86UV7	250 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	AMIGO1	Q86WK6	493 aa		14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	SRRM1	Q8IYB3	904 aa	Known RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	RIBC1	Q8N443	379 aa	Predicted RBP	14.09	□□□□□ -0.15
MATR3-238	ENST00000512107	BANP	Q8N9N5	519 aa		14.09	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms