RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 POM121BA6NF01 834 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 SYCE1LA8MT33 242 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 A8MUI8 341 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 F5H423 210 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 AKAP8O43823 692 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 ZFAND5O76080 213 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 ZNF24P17028 368 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 MMP11P24347 488 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 TRIM23P36406 574 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 CYB561P49447 251 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 MAN2A2P49641 1150 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 CLCN2P51788 898 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 AP1S2P56377 157 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 CTBP2P56545 445 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 WNT3AP56704 352 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 IFI35P80217 286 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 BNC1Q01954 994 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 ZFP36L1Q07352 338 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 IHHQ14623 411 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 CNGA3Q16281 694 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 IL17AQ16552 155 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 CBWD6Q4V339 395 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 C1QTNF12Q5T7M4 302 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 KAZNQ674X7 775 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 TTC19Q6DKK2 380 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 RPUSD3Q6P087 351 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 ARHGAP11AQ6P4F7 1023 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 TRIM40Q6P9F5 258 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 KDELC1Q6UW63 502 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 PACS1Q6VY07 963 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 MEX3BQ6ZN04 569 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 GPRIN1Q7Z2K8 1008 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 CIR1Q86X95 450 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 GRAMD1CQ8IYS0 662 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 SLC25A45Q8N413 288 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 MEIOBQ8N635 442 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 C19orf47Q8N9M1 422 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 OR4E2Q8NGC2 313 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 ZFP28Q8NHY6 868 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 CT55Q8WUE5 264 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 HTR3CQ8WXA8 447 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 ALKBH8Q96BT7 664 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 THOC3Q96J01 351 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 SEC16BQ96JE7 1060 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 MRGPRX3Q96LB0 322 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 BMFQ96LC9 184 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 TWNKQ96RR1 684 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 JMJD8Q96S16 334 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 HGH1Q9BTY7 390 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 KIR3DX1Q9H7L2 352 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 SACM1LQ9NTJ5 587 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 PIGVQ9NUD9 493 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 SPATS2LQ9NUQ6 558 aaKnown RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 BTRCQ9Y297 605 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 ZKSCAN5Q9Y2L8 839 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 PCDHGC4Q9Y5F7 938 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 MAGED1Q9Y5V3 778 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 B3GALT1Q9Y5Z6 326 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 GPR179Q6PRD1 2367 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 TNRC18O15417 2968 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 GREB1Q4ZG55 1949 aa2.76□□□□□ -1.97
CLOCK-209ENST00000511124 RP1L1Q8IWN7 2480 aaPredicted RBP2.76□□□□□ -1.97
CLOCK-209ENST00000511124 IGHV5-10-1A0A0J9YXX1 117 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 TLDC2A0PJX2 215 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PMS2P1A4D2B8 440 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 GOLGA6L10A6NI86 522 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RAD51BO15315 384 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SGTAO43765 313 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PRAMEF2O60811 474 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 BCAS2O75934 225 aaPredicted RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 BEST1O76090 585 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 DKK1O94907 266 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CLDN14O95500 239 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PRAMEF1O95521 474 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PLGP00747 810 aaPredicted RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ESR1P03372 595 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SERPINB3P29508 390 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 DRD3P35462 400 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ACVRL1P37023 503 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RPL34P49207 117 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 TAGLNQ01995 201 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CHRNB3Q05901 458 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 PTP4A2Q12974 167 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 GAB1Q13480 694 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 KEAP1Q14145 624 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CSHL1Q14406 222 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 KRT31Q15323 416 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CXorf57Q6NSI4 855 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 FAM92BQ6ZTR7 304 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 SYDE1Q6ZW31 735 aaPredicted RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CROCCP2Q86T23 111 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 CDH24Q86UP0 819 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 MCATQ8IVS2 390 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ARHGEF19Q8IW93 802 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 NKAPQ8N5F7 415 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 EMC1Q8N766 993 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 ENDOVQ8N8Q3 282 aaKnown RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 TP53I13Q8NBR0 393 aaPredicted RBP2.75□□□□□ -1.97
CLOCK-209ENST00000511124 OR2L2Q8NH16 312 aa2.75□□□□□ -1.97
CLOCK-209ENST00000511124 RAB3IL1Q8TBN0 382 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms