RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 H3BMM5 538 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 SMAPO00193 183 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.4
CLDND1-220ENST00000508902 CTSBP07858 339 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 FGF5P12034 268 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 ATP5DP30049 168 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 CDKN2DP55273 166 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 SLC7A5Q01650 507 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 FOXM1Q08050 763 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 TMED2Q15363 201 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 GPR19Q15760 415 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 PRAMEF17Q5VTA0 474 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 CYHR1Q6ZMK1 362 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 LMNTD2Q8IXW0 634 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 C2orf73Q8N5S3 287 aaPredicted RBP17.58■□□□□ 0.4
CLDND1-220ENST00000508902 NOA1Q8NC60 698 aaKnown RBP17.58■□□□□ 0.4
CLDND1-220ENST00000508902 KCNJ9Q92806 393 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 LRRC39Q96DD0 335 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 TRAPPC9Q96Q05 1148 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 NAT9Q9BTE0 207 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 FAM60AQ9NP50 221 aa17.58■□□□□ 0.4
CLDND1-220ENST00000508902 ESYT3A0FGR9 886 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 F8W8V4 182 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 STMND1H3BQB6 276 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 POLR1CO15160 346 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 PRICKLE3O43900 615 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 RAD1O60671 282 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 STK17BO94768 372 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 CHRM3P20309 590 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 CD82P27701 267 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 SHMT2P34897 504 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 GABRA4P48169 554 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 COL9A2Q14055 689 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 FRG1Q14331 258 aaKnown RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 KLHL38Q2WGJ6 581 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 UBAP2Q5T6F2 1119 aaKnown RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 KIAA1614Q5VZ46 1190 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 SPESP1Q6UW49 350 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 PCSK4Q6UW60 755 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 CEACAM20Q6UY09 585 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 TAX1BP1Q86VP1 789 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 CPNE9Q8IYJ1 553 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 FBXO25Q8TCJ0 367 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 CALML6Q8TD86 181 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 ZNF501Q96CX3 271 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 BBC3Q96PG8 261 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 MCMBPQ9BTE3 642 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 LRRC1Q9BTT6 524 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 AKIRIN1Q9H9L7 192 aaPredicted RBP17.57■□□□□ 0.4
CLDND1-220ENST00000508902 C1GALT1Q9NS00 363 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 MOCS1Q9NZB8 636 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 POLG2Q9UHN1 485 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 DHRS7Q9Y394 339 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 HEATR5BQ9P2D3 2071 aa17.57■□□□□ 0.4
CLDND1-220ENST00000508902 PCM1Q15154 2024 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 A0A1W2PPV9 198 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 PIPSLA2A3N6 862 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 H3BMH7 237 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 ZBTB11O95625 1053 aaPredicted RBP17.56■□□□□ 0.4
CLDND1-220ENST00000508902 CDH3P22223 829 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 RAB28P51157 221 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 YBX1P67809 324 aaKnown RBP17.56■□□□□ 0.4
CLDND1-220ENST00000508902 CXADRP78310 365 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 HSD11B2P80365 405 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 TUBB3Q13509 450 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 FASTKQ14296 549 aaKnown RBP17.56■□□□□ 0.4
CLDND1-220ENST00000508902 TMEM164Q5U3C3 297 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 PWWP2BQ6NUJ5 590 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 ARMC6Q6NXE6 501 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 PIWIL4Q7Z3Z4 852 aaKnown RBP17.56■□□□□ 0.4
CLDND1-220ENST00000508902 MAATS1Q7Z4T9 603 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 KMT5CQ86Y97 462 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 SNRNP27Q8WVK2 155 aaKnown RBP17.56■□□□□ 0.4
CLDND1-220ENST00000508902 SEC14L1Q92503 715 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 ZNF592Q92610 1267 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 DLG3Q92796 817 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 TEFMQ96QE5 360 aaKnown RBP17.56■□□□□ 0.4
CLDND1-220ENST00000508902 OLFM1Q99784 485 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 ASPSCR1Q9BZE9 553 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 OR6C2Q9NZP2 312 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 KLHL20Q9Y2M5 609 aa17.56■□□□□ 0.4
CLDND1-220ENST00000508902 LOC101059948A0A1B0GTJ6 334 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 CXorf49A8MYA2 514 aaPredicted RBP17.55■□□□□ 0.4
CLDND1-220ENST00000508902 C2orf74A8MZ97 194 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 K7ENP7 123 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 MATN2O00339 956 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 TERTO14746 1132 aaKnown RBP17.55■□□□□ 0.4
CLDND1-220ENST00000508902 RASGRF2O14827 1237 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 KPNA5O15131 536 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 NRP2O60462 931 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 PSIP1O75475 530 aaKnown RBP17.55■□□□□ 0.4
CLDND1-220ENST00000508902 SPAG6O75602 509 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 ERGP11308 486 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 F8A1P23610 371 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 PSMB5P28074 263 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 GPX6P59796 221 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 PRKAA1Q13131 559 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 WHAMMP3Q1A5X7 153 aa17.55■□□□□ 0.4
CLDND1-220ENST00000508902 INO80CQ6PI98 192 aaPredicted RBP17.55■□□□□ 0.4
CLDND1-220ENST00000508902 CAPN12Q6ZSI9 719 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms