RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 ITGAXP20702 1163 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 AGXTP21549 392 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 OTX2P32243 289 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 CSE1LP55060 971 aaKnown RBP17.26■□□□□ 0.35
SKP2-204ENST00000508514 CDH17Q12864 832 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 MLIPQ5VWP3 458 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 MRPL14Q6P1L8 145 aaKnown RBP17.26■□□□□ 0.35
SKP2-204ENST00000508514 MRGPREQ86SM8 312 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 LDB1Q86U70 411 aaPredicted RBP17.26■□□□□ 0.35
SKP2-204ENST00000508514 GPR135Q8IZ08 494 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 SYCE1Q8N0S2 351 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 ZNF655Q8N720 491 aaPredicted RBP17.26■□□□□ 0.35
SKP2-204ENST00000508514 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.26■□□□□ 0.35
SKP2-204ENST00000508514 ALS2CR12Q96Q35 445 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 RANBP9Q96S59 729 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 DHRS4Q9BTZ2 278 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 AP1M1Q9BXS5 423 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 SLC7A5P2Q9GIP4 190 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 CASS4Q9NQ75 786 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 CIDEBQ9UHD4 219 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 RIMKLBQ9ULI2 386 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 VPS4AQ9UN37 437 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 AP1M2Q9Y6Q5 423 aa17.26■□□□□ 0.35
SKP2-204ENST00000508514 SPTAN1Q13813 2472 aaKnown RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 CCDC88CQ9P219 2028 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 PRRC2CQ9Y520 2896 aaKnown RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 TCP11X1B4DZS4 312 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 C9J4A7 227 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 QSOX1O00391 747 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 ZSCAN9O15535 394 aaPredicted RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 GPC4O75487 556 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 SNRNP200O75643 2136 aaKnown RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 PTMAP06454 111 aaKnown RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 UMODP07911 640 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 OR56A5P0C7T3 313 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 PKLRP30613 574 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 STIP1P31948 543 aaKnown RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 KIF5AQ12840 1032 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 SSPNQ14714 243 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 SLC9A5Q14940 896 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 KYNUQ16719 465 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 SLC5A12Q1EHB4 618 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 PLEKHN1Q494U1 663 aaPredicted RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 SLC22A15Q8IZD6 547 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 C2orf73Q8N5S3 287 aaPredicted RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 EFCAB3Q8N7B9 438 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 DNAAF3Q8N9W5 541 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 OR4L1Q8NH43 312 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 C1orf54Q8WWF1 131 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 C19orf60Q96EN9 201 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 GPR83Q9NYM4 423 aa17.25■□□□□ 0.35
SKP2-204ENST00000508514 MARCH4Q9P2E8 410 aaPredicted RBP17.25■□□□□ 0.35
SKP2-204ENST00000508514 HEATR9A2RTY3 570 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 ERI2A8K979 691 aaKnown RBP17.24■□□□□ 0.35
SKP2-204ENST00000508514 ISM1B1AKI9 464 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 DPM1O60762 260 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 ZSCAN5DPP0CG00 497 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 ADRA1DP25100 572 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 DCDP81605 110 aaKnown RBP17.24■□□□□ 0.35
SKP2-204ENST00000508514 MRPL49Q13405 166 aaKnown RBP17.24■□□□□ 0.35
SKP2-204ENST00000508514 KIR2DS3Q14952 304 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 LYPLAL1Q5VWZ2 237 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 AFTPHQ6ULP2 937 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 PPP1R32Q7Z5V6 425 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 KRT222Q8N1A0 295 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 SGSM3Q96HU1 749 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 IL17FQ96PD4 163 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 PTRH2Q9Y3E5 179 aaKnown RBP17.24■□□□□ 0.35
SKP2-204ENST00000508514 TCAF1Q9Y4C2 921 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 ICE1Q9Y2F5 2266 aa17.24■□□□□ 0.35
SKP2-204ENST00000508514 RP1L1Q8IWN7 2480 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 KRT86O43790 486 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 IFNB1P01574 187 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 MAGP20916 626 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 FDFT1P37268 417 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 RRADP55042 308 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 PLOD1Q02809 727 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 HSPA14Q0VDF9 509 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 SNX1Q13596 522 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 SIX1Q15475 284 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 KCTD19Q17RG1 926 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 NKAIN1Q4KMZ8 207 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 SYTL3Q4VX76 610 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 DNAJC21Q5F1R6 531 aaKnown RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 DCAF10Q5QP82 559 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 FCRL6Q6DN72 434 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 HOOK3Q86VS8 718 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 RAB43Q86YS6 212 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 SLC13A5Q86YT5 568 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 OR2Y1Q8NGV0 311 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 OR6P1Q8NGX9 317 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 PROKR1Q8TCW9 393 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 N4BP2L2Q92802 583 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 PNPLA2Q96AD5 504 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 CARD6Q9BX69 1037 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 ZNF552Q9H707 407 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 ZBTB20Q9HC78 741 aaPredicted RBP17.23■□□□□ 0.35
SKP2-204ENST00000508514 CHRAC1Q9NRG0 131 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 RAB6BQ9NRW1 208 aa17.23■□□□□ 0.35
SKP2-204ENST00000508514 P4HTMQ9NXG6 502 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms