RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 CHAF1BQ13112 559 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 DNAJC21Q5F1R6 531 aaKnown RBP13.79□□□□□ -0.2
RAB28-205ENST00000508274 FAM198BQ6UWH4 519 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 C4orf22Q6V702 233 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 SYVN1Q86TM6 617 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 TAX1BP1Q86VP1 789 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 C2orf73Q8N5S3 287 aaPredicted RBP13.79□□□□□ -0.2
RAB28-205ENST00000508274 ASZ1Q8WWH4 475 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 MS4A14Q96JA4 679 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 IL17FQ96PD4 163 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 TRIM56Q9BRZ2 755 aaKnown RBP13.79□□□□□ -0.2
RAB28-205ENST00000508274 MENTQ9BUN1 341 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 P2RY12Q9H244 342 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 OR6C2Q9NZP2 312 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 BFARQ9NZS9 450 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 SERTAD3Q9UJW9 196 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 TLK1Q9UKI8 766 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 RUVBL2Q9Y230 463 aaKnown RBP13.79□□□□□ -0.2
RAB28-205ENST00000508274 KLHL20Q9Y2M5 609 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 NBASA2RRP1 2371 aa13.79□□□□□ -0.2
RAB28-205ENST00000508274 A0A0J9YY10 115 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 F8W8V4 182 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 H3BMH7 237 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 AVILO75366 819 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 RFPL1O75677 317 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 SLCO2B1O94956 709 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 VAPBO95292 243 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 PDGFAP04085 211 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 APOA4P06727 396 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 TPSB2P20231 275 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 AOAHP28039 575 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 PPARGP37231 505 aaPredicted RBP13.78□□□□□ -0.2
RAB28-205ENST00000508274 NPY2RP49146 381 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 KCNC4Q03721 635 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 GRB7Q14451 532 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 KCNJ11Q14654 390 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 TPSAB1Q15661 275 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 ANKRD22Q5VYY1 191 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 PTRHD1Q6GMV3 140 aaKnown RBP13.78□□□□□ -0.2
RAB28-205ENST00000508274 LRRC8BQ6P9F7 803 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 MPP5Q8N3R9 675 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 OTUD6BQ8N6M0 293 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 KIFC1Q9BW19 673 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 TSSK1BQ9BXA7 367 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 SLC7A5P2Q9GIP4 190 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 IL1RAPL1Q9NZN1 696 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 NFS1Q9Y697 457 aa13.78□□□□□ -0.2
RAB28-205ENST00000508274 MKRN2OSH3BPM6 223 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 MAP3K7O43318 606 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 TMEM63AO94886 807 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 CSRP3P50461 194 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 RAB28P51157 221 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 EIF3BP55884 814 aaKnown RBP13.77□□□□□ -0.21
RAB28-205ENST00000508274 GPS1Q13098 491 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 KYNUQ16719 465 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 CTSL3PQ5NE16 218 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 ZNF385CQ66K41 422 aaPredicted RBP13.77□□□□□ -0.21
RAB28-205ENST00000508274 APLFQ8IW19 511 aaPredicted RBP13.77□□□□□ -0.21
RAB28-205ENST00000508274 DCUN1D3Q8IWE4 304 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 ADAMTS17Q8TE56 1095 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 N4BP2L2Q92802 583 aaPredicted RBP13.77□□□□□ -0.21
RAB28-205ENST00000508274 TCTN2Q96GX1 697 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 SPRTNQ9H040 489 aaPredicted RBP13.77□□□□□ -0.21
RAB28-205ENST00000508274 MRM3Q9HC36 420 aaKnown RBP13.77□□□□□ -0.21
RAB28-205ENST00000508274 GNPTGQ9UJJ9 305 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 TSR3Q9UJK0 312 aaKnown RBP13.77□□□□□ -0.21
RAB28-205ENST00000508274 ANAPC2Q9UJX6 822 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 SOX13Q9UN79 622 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 SNX7Q9UNH6 387 aa13.77□□□□□ -0.21
RAB28-205ENST00000508274 ARGFXA6NJG6 315 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 NDUFS3O75489 264 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 OR2B3O76000 313 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 KRT14P02533 472 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 F7P08709 466 aaPredicted RBP13.76□□□□□ -0.21
RAB28-205ENST00000508274 RAB40ALP0C0E4 278 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 CBSLP0DN79 551 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 MAGP20916 626 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 CBSP35520 551 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 CASRP41180 1078 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 PTGIRP43119 386 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 BDKRB1P46663 353 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 CDK16Q00536 496 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 KIR2DS3Q14952 304 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 TMED2Q15363 201 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 SLC5A12Q1EHB4 618 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 CCSMST1Q4G0I0 132 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 C1orf189Q5VU69 101 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 TCTN3Q6NUS6 607 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 GPR135Q8IZ08 494 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 RASGEF1CQ8N431 466 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 THAP4Q8WY91 577 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 SEC14L1Q92503 715 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 FAM136AQ96C01 138 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 BIRC8Q96P09 236 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 NLNQ9BYT8 704 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 HOMER3Q9NSC5 361 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 DHCR7Q9UBM7 475 aaKnown RBP13.76□□□□□ -0.21
RAB28-205ENST00000508274 TCFL5Q9UL49 500 aa13.76□□□□□ -0.21
RAB28-205ENST00000508274 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms