RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 OR6C1Q96RD1 312 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 TCF12Q99081 682 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 DDX47Q9H0S4 455 aaKnown RBP8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 ING2Q9H160 280 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 ARFGAP3Q9NP61 516 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 CATSPERZQ9NTU4 200 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 PIH1D1Q9NWS0 290 aaKnown RBP8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 SLC23A2Q9UGH3 650 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 DNAJC16Q9Y2G8 782 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 COLEC10Q9Y6Z7 277 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 SPG11Q96JI7 2443 aa8.95□□□□□ -0.98
UBE2D3-223ENST00000508249 ANKHD1Q8IWZ3 2542 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 CCDC88CQ9P219 2028 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 ANKUB1A6NFN9 424 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 FAM187AA6NFU0 413 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 C21orf140B9A014 251 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 H3BMM5 538 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 IFRD1O00458 451 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 PRMT5O14744 637 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 TOX3O15405 576 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 GPR39O43194 453 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 KIF1CO43896 1103 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 SPAG6O75602 509 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 USP1O94782 785 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 TTC4O95801 387 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 SPTBP11277 2137 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 OGNP20774 298 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 RPS3P23396 243 aaKnown RBP eCLIP8.94□□□□□ -0.985e-12■□□□□ 9.4
UBE2D3-223ENST00000508249 MGAT1P26572 445 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 MAGEA3P43357 314 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 ITGA1P56199 1179 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 DR1Q01658 176 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 CKAP4Q07065 602 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 FOXM1Q08050 763 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 TUBB2AQ13885 445 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 ZRSR2Q15696 482 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 CCDC38Q502W7 563 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 RNASEH2BQ5TBB1 312 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 FAM69BQ5VUD6 431 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 CYB5D1Q6P9G0 228 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 FAM199XQ6PEV8 388 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 ZNF517Q6ZMY9 492 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 MAATS1Q7Z4T9 603 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 PLXDC1Q8IUK5 500 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 PIANPQ8IYJ0 282 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 CALML6Q8TD86 181 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 THAP4Q8WY91 577 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 LRRC39Q96DD0 335 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 TRIM44Q96DX7 344 aaPredicted RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 CAPZA3Q96KX2 299 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 LURAP1Q96LR2 239 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 SERPINB12Q96P63 405 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 PANX3Q96QZ0 392 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 SMAD5Q99717 465 aaKnown RBP8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 TUBB2BQ9BVA1 445 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 ZMYND15Q9H091 742 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 COG4Q9H9E3 785 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 CHRAC1Q9NRG0 131 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 SMARCAL1Q9NZC9 954 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 LNPEPQ9UIQ6 1025 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 ZNF451Q9Y4E5 1061 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 PCDHGB7Q9Y5F8 929 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 MRFAP1Q9Y605 127 aa8.94□□□□□ -0.98
UBE2D3-223ENST00000508249 SVILO95425 2214 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 TCRBV7S3A2A0A539 114 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 MATN2O00339 956 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 KPNA5O15131 536 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 CD3EAPO15446 510 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 SGTAO43765 313 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 DPM1O60762 260 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 ZG16O60844 167 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 NDUFS3O75489 264 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 TMEM63AO94886 807 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 MTHFD1P11586 935 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 PTPN4P29074 926 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 SLC19A1P41440 591 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 MAPK9P45984 424 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 PPM1FP49593 454 aaPredicted RBP8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 CCL11P51671 97 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 ADARP55265 1226 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 ILF2Q12905 390 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 NFE2L1Q14494 772 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 IL11RAQ14626 422 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 TMED2Q15363 201 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 RPE65Q16518 533 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 PLEKHN1Q494U1 663 aaPredicted RBP8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.93□□□□□ -0.986e-7■■■■□ 24.1
UBE2D3-223ENST00000508249 CASC4Q6P4E1 433 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 DET1Q7L5Y6 550 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 PRSS42Q7Z5A4 293 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 SYVN1Q86TM6 617 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 CAND1Q86VP6 1230 aaKnown RBP8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 PDIK1LQ8N165 341 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 CARFQ8N187 725 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 GPR150Q8NGU9 434 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 ELMO2Q96JJ3 720 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 CARD6Q9BX69 1037 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 RAB33BQ9H082 229 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 FAM96AQ9H5X1 160 aa8.93□□□□□ -0.98
UBE2D3-223ENST00000508249 MVB12BQ9H7P6 319 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms