RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 DLG3Q92796 817 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 FER1L6-AS2Q96M78 137 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 AKIRIN1Q9H9L7 192 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 MRM3Q9HC36 420 aaKnown RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 MLXIPLQ9NP71 852 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 TXLNGQ9NUQ3 528 aa13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 GPN3Q9UHW5 284 aaPredicted RBP13.93□□□□□ -0.18
HMGCS1-203ENST00000507004 A0A0U1RQJ8 604 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 ARGFXA6NJG6 315 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 CD3EAPO15446 510 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 ZSCAN9O15535 394 aaPredicted RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 DPM1O60762 260 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 NDUFS3O75489 264 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 CEACAM4O75871 244 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 SLCO2B1O94956 709 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 SPTBP11277 2137 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 PVRP15151 417 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 PKLRP30613 574 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 CCR7P32248 378 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 RPL22P35268 128 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 CCNFP41002 786 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 CD97P48960 835 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 RPS18P62269 152 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 BASP1P80723 227 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 DCDP81605 110 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 SNX1Q13596 522 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 IL10RAQ13651 578 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 SSPNQ14714 243 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 BRD3Q15059 726 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 ZC3H12BQ5HYM0 836 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 PTRHD1Q6GMV3 140 aaKnown RBP13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 MRNIPQ6NTE8 343 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 FAM198BQ6UWH4 519 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 TMEM135Q86UB9 458 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 EFCAB3Q8N7B9 438 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 GLIS1Q8NBF1 620 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 RAD51AP1Q96B01 352 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 RNF31Q96EP0 1072 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 FOPNLQ96NB1 174 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 TCF12Q99081 682 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 NDC1Q9BTX1 674 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 SLC2A6Q9UGQ3 507 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 NDOR1Q9UHB4 597 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 SLC39A10Q9ULF5 831 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 VPS9D1Q9Y2B5 631 aa13.92□□□□□ -0.18
HMGCS1-203ENST00000507004 ASH1LQ9NR48 2969 aaKnown RBP13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 PEX12O00623 359 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 OR1I1O60431 355 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 PAMP19021 973 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 TPSB2P20231 275 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 CD9P21926 228 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 AOAHP28039 575 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 GRIA1P42261 906 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 PTGIRP43119 386 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 CCL11P51671 97 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 TPSAB1Q15661 275 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 TCTE1Q5JU00 501 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 ZNF385CQ66K41 422 aaPredicted RBP13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 OTOAQ7RTW8 1153 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 OR2L8Q8NGY9 312 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 MIB2Q96AX9 1013 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 VPS50Q96JG6 964 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 RUFY1Q96T51 708 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 CHRAC1Q9NRG0 131 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 TREX1Q9NSU2 369 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 IRAK4Q9NWZ3 460 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 IL1RAPL1Q9NZN1 696 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 C5AR2Q9P296 337 aa13.91□□□□□ -0.18
HMGCS1-203ENST00000507004 TARM1B6A8C7 271 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 FGGP02679 453 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 CAPN1P07384 714 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 ATP5DP30049 168 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 FOLR3P41439 243 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 GABRA4P48169 554 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 ADARP55265 1226 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 SESN2P58004 480 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 UBAP2LQ14157 1087 aaKnown RBP13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 SIX1Q15475 284 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 PTCHD3Q3KNS1 767 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 PRAMEF17Q5VTA0 474 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 LRRC8BQ6P9F7 803 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 DNAJC22Q8N4W6 341 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 FLVCR1-AS1Q8TAF5 88 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 ZUFSPQ96AP4 578 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 ZNF778Q96MU6 729 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 GBP5Q96PP8 586 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 KIFC1Q9BW19 673 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 TRIM55Q9BYV6 548 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 FAM60AQ9NP50 221 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 ENAMQ9NRM1 1142 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 SPHK1Q9NYA1 384 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 GPR83Q9NYM4 423 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 IFT80Q9P2H3 777 aaPredicted RBP13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 CDYLQ9Y232 598 aa13.9□□□□□ -0.18
HMGCS1-203ENST00000507004 NBASA2RRP1 2371 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 MAGEB16A2A368 324 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 TTLL8A6PVC2 850 aa13.89□□□□□ -0.19
HMGCS1-203ENST00000507004 H3BMH7 237 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms