RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SERPINB6P35237 376 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 ARHGAP25P42331 645 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 ABCG1P45844 678 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 CDX1P47902 265 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 SERPINH1P50454 418 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 NUDT6P53370 316 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 MTCP1P56278 107 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 HSD17B7P56937 341 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 FOLH1Q04609 750 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 ARHGAP1Q07960 439 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 RABEP1Q15276 862 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 MAPK11Q15759 364 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 RAB6CQ53S08 254 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 MANEAQ5SRI9 462 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 KLC3Q6P597 504 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 CYB5D1Q6P9G0 228 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF788Q6ZQV5 615 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRSS42Q7Z5A4 293 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 COMMD2Q86X83 199 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 ANKRD13CQ8N6S4 541 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 AMER3Q8N944 861 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 C7orf57Q8NEG2 295 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 ACVR1CQ8NER5 493 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 OR5M8Q8NGP6 311 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 OR5R1Q8NH85 324 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 OR14A16Q8NHC5 309 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC44A1Q8WWI5 657 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 CKAP2Q8WWK9 683 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 OIT3Q8WWZ8 545 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 INPP5DQ92835 1189 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 BICD1Q96G01 975 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 CDKN2AIPNLQ96HQ2 116 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 NYXQ9GZU5 481 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 RAB6CQ9H0N0 254 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 TSPY26PQ9H489 355 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLA2Q9H6Q3 261 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 OSER1Q9NX31 292 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 TUBA8Q9NY65 449 aaPredicted RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCPG1Q9ULG6 757 aa3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 STRAPQ9Y3F4 350 aaKnown RBP3.71□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMEM272A0A1B0GTI8 110 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 hDV102S1A0JD36 115 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ILVBLA1L0T0 632 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 E5RJQ4 531 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ATP9AO75110 1047 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TRIM16O95361 564 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 BMP10O95393 424 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 HEXBP07686 556 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ABHD2P08910 425 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 HOXA11P31270 313 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 MXI1P50539 228 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 MMP15P51511 669 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 UCP2P55851 309 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 EEF1A2Q05639 463 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SRSF1Q07955 248 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 GAMTQ14353 236 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PTGR1Q14914 329 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 LBHQ53QV2 105 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 C11orf63Q6NUN7 778 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 FAM122CQ6P4D5 195 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PODNL1Q6PEZ8 512 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 MFSD7Q6UXD7 560 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 Q6ZTK2 550 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 Q75L30 129 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 CTU1Q7Z7A3 348 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TMPRSS11BQ86T26 416 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZNF410Q86VK4 478 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 AMIGO1Q86WK6 493 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ZBTB44Q8NCP5 570 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRSS3P2Q8NHM4 247 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 VANGL1Q8TAA9 524 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 KIAA1524Q8TCG1 905 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 URGCPQ8TCY9 931 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SLC26A7Q8TE54 656 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 CCDC107Q8WV48 283 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PROX1Q92786 737 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PIGTQ969N2 578 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 DHX58Q96C10 678 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 AP2M1Q96CW1 435 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TXNDC15Q96J42 360 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 KCNK16Q96T55 309 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PKP2Q99959 881 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 ATG101Q9BSB4 218 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SPRY4Q9C004 299 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 LIN28AQ9H9Z2 209 aaKnown RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 SYTL2Q9HCH5 934 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 DNAJC4Q9NNZ3 241 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 POLE3Q9NRF9 147 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PNPLA3Q9NST1 481 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 MIOSQ9NXC5 875 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 GPR132Q9UNW8 380 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 TEX264Q9Y6I9 313 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 NPHP3Q7Z494 1330 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 A0A0A6YYC8 382 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 HYKKA2RU49 373 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 MAGEA13PA6NCF6 341 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 PRR32B1ATL7 298 aa3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 I3L1I5 382 aaPredicted RBP3.7□□□□□ -1.82
TRAPPC13-208ENST00000505553 RASGRF2O14827 1237 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms