RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 FBRSQ9HAH7 460 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 BRF2Q9HAW0 419 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 CMTM6Q9NX76 183 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 CD84Q9UIB8 345 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 RNF11Q9Y3C5 154 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 DNMT3AQ9Y6K1 912 aaPredicted RBP11.05□□□□□ -0.64
NFKB1-205ENST00000505458 KCNE1BA0A087WTH5 132 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 CD1EP15812 388 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 GSK3BP49841 420 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 FCHO2Q0JRZ9 810 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 C9orf64Q5T6V5 341 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 SERPINA13PQ6UXR4 307 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 ERN2Q76MJ5 926 aaKnown RBP11.05□□□□□ -0.64
NFKB1-205ENST00000505458 HM13Q8TCT9 377 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 CGREF1Q99674 301 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 OSBPL11Q9BXB4 747 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 DPEP2Q9H4A9 486 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 CLMPQ9H6B4 373 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 CDH7Q9ULB5 785 aa11.05□□□□□ -0.64
NFKB1-205ENST00000505458 A6NHS1 94 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 FADS2P1A8MWK0 482 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ADRB3P13945 408 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 FASP25445 335 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 CASP2P42575 452 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 C21orf58P58505 322 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 LIPEQ05469 1076 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 CBX2Q14781 532 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 LPCAT4Q643R3 524 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 TMEM154Q6P9G4 183 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 UNC5DQ6UXZ4 953 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 LPCAT2Q7L5N7 544 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 DET1Q7L5Y6 550 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 RGL4Q8IZJ4 473 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 CXorf40AQ8TE69 158 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 FGF13Q92913 245 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 LRCH3Q96II8 777 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 FCRL1Q96LA6 429 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 TMEM245Q9H330 911 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 THAP10Q9P2Z0 257 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 TSR3Q9UJK0 312 aaKnown RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ARPC2O15144 300 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 SGTAO43765 313 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 LZTS3O60299 673 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 CSPG5O95196 566 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 RPN2P04844 631 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 NRIP1P48552 1158 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 RPS14P62263 151 aaKnown RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 IRF8Q02556 426 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 MAPKAPK3Q16644 382 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 SFT2D3Q587I9 215 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 INTS11Q5TA45 600 aaKnown RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 GRHL2Q6ISB3 625 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 DNAJC5GQ8N7S2 189 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 SORCS1Q8WY21 1168 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 UBE2E3Q969T4 207 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 TRIM39Q9HCM9 518 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ANAPC2Q9UJX6 822 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 MAN2B2Q9Y2E5 1009 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 PCDHGA11Q9Y5H2 935 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ZNF839A8K0R7 811 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 RNASEH1O60930 286 aaKnown RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ARSAP15289 507 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 HSD17B2P37059 387 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 GRIA3P42263 894 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 GPR1P46091 355 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ASMTP46597 345 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 AQP4P55087 323 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 SH3BGRP55822 239 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 PHEXP78562 749 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 LAPTM5Q13571 262 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 E2F2Q14209 437 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 C18orf21Q32NC0 220 aaPredicted RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 PAGE2BQ5JRK9 111 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 NANOGP8Q6NSW7 305 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 SCIMPQ6UWF3 145 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 TMC5Q6UXY8 1006 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ADAMTSL4Q6UY14 1074 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 RFLNAQ6ZTI6 216 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 PAPD5Q8NDF8 572 aaKnown RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 OR56A3Q8NH54 315 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 ITCHQ96J02 903 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 PKP2Q99959 881 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 C9orf16Q9BUW7 83 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 EHD1Q9H4M9 534 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 NANOGQ9H9S0 305 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 NDUFA13Q9P0J0 144 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 MSRAQ9UJ68 235 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 PACSIN3Q9UKS6 424 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 RUVBL1Q9Y265 456 aaKnown RBP11.04□□□□□ -0.64
NFKB1-205ENST00000505458 AP1M2Q9Y6Q5 423 aa11.04□□□□□ -0.64
NFKB1-205ENST00000505458 H0YIV9 168 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 H3BM21 787 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 TSPAN6O43657 245 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 GRIA2P42262 883 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 TCEAL5Q5H9L2 206 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 TBCELQ5QJ74 424 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 PCDHAC1Q9H158 963 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 IL1RL2Q9HB29 575 aa11.03□□□□□ -0.64
NFKB1-205ENST00000505458 CNOT6Q9ULM6 557 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms