RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ADGRF3Q8IZF5 1079 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 NLGN4YQ8NFZ3 816 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ATG4AQ8WYN0 398 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 DPF1Q92782 380 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 SHISA4Q96DD7 197 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 COQ7Q99807 217 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 VN1R3Q9BXE9 311 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 GEMIN7Q9H840 131 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 KLHL1Q9NR64 748 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 FARSBQ9NSD9 589 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 MTMR10Q9NXD2 777 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 MTCH1Q9NZJ7 389 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ABCC4O15439 1325 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 KAT6AQ92794 2004 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 GXYLT2A0PJZ3 443 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM120BA0PK00 339 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 TRDMT1O14717 391 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 MAGEB2O15479 319 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 PPIP5K2O43314 1243 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ICAM1P05362 532 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ALDOCP09972 364 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 G6PDP11413 515 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 SLC1A6P48664 564 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 CLK3P49761 638 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 NDUFV1P49821 464 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 GZMKP49863 264 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 RPS8P62241 208 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 DMP1Q13316 513 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 EIF4HQ15056 248 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 NAB2Q15742 525 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 DCAF6Q58WW2 860 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 GJB7Q6PEY0 223 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 CCDC137Q6PK04 289 aaKnown RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 C11orf57Q6ZUT1 292 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 MICALCLQ6ZW33 695 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 STKLD1Q8NE28 680 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 C7orf34Q96L11 122 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 NACC1Q96RE7 527 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 RTP3Q9BQQ7 232 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 PIGQQ9BRB3 760 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 ROPN1BQ9BZX4 212 aaPredicted RBP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 AZI2Q9H6S1 392 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.08□□□□□ -1.6
NIPBL-204ENST00000504430 HSFX1Q9UBD0 423 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 CTSFQ9UBX1 484 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 SLC24A2Q9UI40 661 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 NFU1Q9UMS0 254 aa5.08□□□□□ -1.6
NIPBL-204ENST00000504430 TRBV2A0A0J9YWF9 115 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 FEZF1A0PJY2 475 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 FCGR3BO75015 233 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CDH16O75309 829 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CSDE1O75534 798 aaKnown RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CREG1O75629 220 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SUN1O94901 812 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 POMCP01189 267 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 MBP02144 154 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SRMP19623 302 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ACADLP28330 430 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CD1BP29016 333 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 HOXA6P31267 233 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 CETN2P41208 172 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 GPX6P59796 221 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TROAPQ12815 778 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 PLEKHN1Q494U1 663 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 PAGE2BQ5JRK9 111 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TRIM65Q6PJ69 517 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 UQCC3Q6UW78 93 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 YRDCQ86U90 279 aaKnown RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 DNAAF3Q8N9W5 541 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TFAP2CQ92754 450 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 KIFAP3Q92845 792 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 PPP1R14BQ96C90 147 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TAAR6Q96RI8 345 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SSX3Q99909 188 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 NPLQ9BXD5 320 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SLC39A8Q9C0K1 460 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 UBQLN3Q9H347 655 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 PCDH18Q9HCL0 1135 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TMLHEQ9NVH6 421 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TAS2R14Q9NYV8 317 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SEMA5BQ9P283 1151 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 NCAPD2Q15021 1401 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 NRP1O14786 923 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 WIPF1O43516 503 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ZNF217O75362 1048 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 VPS26AO75436 327 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 NAGAP17050 411 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ZNF10P21506 573 aaPredicted RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 ETV5P41161 510 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 AGTR2P50052 363 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 MAP3K7CLP57077 242 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 UBE2IP63279 158 aaKnown RBP5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TMEM41BQ5BJD5 291 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 RABL3Q5HYI8 236 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 WLSQ5T9L3 541 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SPECC1LQ69YQ0 1117 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 TXNDC8Q6A555 127 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 LCTLQ6UWM7 567 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 SIGLEC15Q6ZMC9 328 aa5.07□□□□□ -1.6
NIPBL-204ENST00000504430 RHOUQ7L0Q8 258 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms