RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 BTN3A3O00478 584 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 CDH16O75309 829 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 GUCA1CO95843 209 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 MT-ND3P03897 115 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 RPN2P04844 631 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 MPOP05164 745 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 C8GP07360 202 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 LTA4HP09960 611 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 PYGBP11216 843 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 HOXB3P14651 431 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 PNLIPP16233 465 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 KRT15P19012 456 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 POLR2CP19387 275 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 TFEBP19484 476 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 MAP4P27816 1152 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 CSF2RBP32927 897 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 GPR3P46089 330 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 GLRBP48167 497 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 KCNC1P48547 511 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 FASTKQ14296 549 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 CASP8Q14790 479 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 KRT71Q3SY84 523 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 TAF1BQ53T94 588 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 SNAP47Q5SQN1 464 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 CEP85LQ5SZL2 805 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 TTC23LQ6PF05 361 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 SBSNQ6UWP8 590 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 RBM12BQ8IXT5 1001 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 PPFIBP2Q8ND30 876 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 OR9A1PQ8NGU1 263 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 EXT2Q93063 718 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 RAD51AP1Q96B01 352 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 MTBPQ96DY7 904 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 AHCYL2Q96HN2 611 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 MENTQ9BUN1 341 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 SLC12A9Q9BXP2 914 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 ROPN1BQ9BZX4 212 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 DERL2Q9GZP9 239 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 ZMYND15Q9H091 742 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 ABCG4Q9H172 646 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 SRMSQ9H3Y6 488 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 TFB2MQ9H5Q4 396 aaKnown RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 ALG9Q9H6U8 611 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 UCK1Q9HA47 277 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 ROPN1Q9HAT0 212 aaPredicted RBP12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 ABCF3Q9NUQ8 709 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 SPHK1Q9NYA1 384 aa12.87□□□□□ -0.35
PDLIM7-212ENST00000504380 UNC13CQ8NB66 2214 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 GP1BAP07359 652 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 CYP2A7P20853 494 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 PKLRP30613 574 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 CCNFP41002 786 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 EPHA4P54764 986 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 GFERP55789 205 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 INSM1Q01101 510 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 C18orf21Q32NC0 220 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 LRRC8EQ6NSJ5 796 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 C16orf46Q6P387 395 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 ZNF574Q6ZN55 896 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 AMIGO1Q86WK6 493 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 FAM20CQ8IXL6 584 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 ADGRF3Q8IZF5 1079 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 LINC01555Q8NAE3 123 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 MCOLN3Q8TDD5 553 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 ZFPM2Q8WW38 1151 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 SCYL1Q96KG9 808 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 PPM1MQ96MI6 270 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 GPR78Q96P69 363 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 TMEM109Q9BVC6 243 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 CENPHQ9H3R5 247 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 PPCSQ9HAB8 311 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 PARVBQ9HBI1 364 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 NMRAL1Q9HBL8 299 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 HRASLS2Q9NWW9 162 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 KLHL3Q9UH77 587 aa12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 APOBEC2Q9Y235 224 aaKnown RBP12.86□□□□□ -0.35
PDLIM7-212ENST00000504380 GSAPA4D1B5 854 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 A8MU76 341 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 MYO1CO00159 1063 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 NTN3O00634 580 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 SLC16A5O15375 505 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 KIF1CO43896 1103 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 KLHL2O95198 593 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 PEBP1P30086 187 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 SHMT2P34897 504 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 ATP6V0D1P61421 351 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 ILKQ13418 452 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 TSTA3Q13630 321 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 COL9A2Q14055 689 aaPredicted RBP12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 RASA2Q15283 850 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 PPP1R3AQ16821 1122 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 FBXO48Q5FWF7 155 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 IRGCQ6NXR0 463 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 SUSD1Q6UWL2 747 aa12.85□□□□□ -0.35
PDLIM7-212ENST00000504380 FAM92BQ6ZTR7 304 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms