RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 POU2F1P14859 743 aa16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 VARSP26640 1264 aaKnown RBP16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 AP3S2P59780 193 aa16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 TNFAIP8L3Q5GJ75 292 aa16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 CWF19L1Q69YN2 538 aaKnown RBP16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 FRRS1Q6ZNA5 592 aa16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 C11orf84Q9BUA3 381 aaPredicted RBP16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 DNAAF2Q9NVR5 837 aaKnown RBP16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 SCML2Q9UQR0 700 aa16.21■□□□□ 0.19
PCDHA1-203ENST00000504120 CLDN25C9JDP6 229 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 UBXN7O94888 489 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 RPLP0P05388 317 aaKnown RBP16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 MYCLP1P12525 358 aaPredicted RBP16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 IL7RP16871 459 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 ZC3HC1Q86WB0 502 aaKnown RBP16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 COX18Q8N8Q8 333 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 COPS4Q9BT78 406 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 TAPBPLQ9BX59 468 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 AKTIPQ9H8T0 292 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 TEX264Q9Y6I9 313 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 LRP6O75581 1613 aa16.21■□□□□ 0.18
PCDHA1-203ENST00000504120 SEPHS1P49903 392 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 CLCN4P51793 760 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 MLLT6P55198 1093 aaPredicted RBP16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 TYSND1Q2T9J0 566 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 PRR23BQ6ZRT6 265 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 PACRGLQ8N7B6 248 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 LRRC58Q96CX6 371 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 NKIRAS2Q9NYR9 191 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 MKL2Q9ULH7 1088 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 HS3ST4Q9Y661 456 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 RHPN2P1A8MT19 583 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 HAS3O00219 553 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 TMEM198Q66K66 360 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 ZCCHC12Q6PEW1 402 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 TOP1MTQ969P6 601 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 CAMK1GQ96NX5 476 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC32A1Q9H598 525 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 CACNG4Q9UBN1 327 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 ZNF221Q9UK13 617 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 CLEC4AQ9UMR7 237 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 ZNF99A8MXY4 864 aaPredicted RBP16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC31A1O15431 190 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 EFNA1P20827 205 aaPredicted RBP16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 RYKP34925 604 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 CCR8P51685 355 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 MERTKQ12866 999 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 NUDT13Q86X67 352 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 AHI1Q8N157 1196 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 NLGN2Q8NFZ4 835 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 PIK3R3Q92569 461 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC22A18Q96BI1 424 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 ZSCAN5AQ9BUG6 496 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 RNF39Q9H2S5 420 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 TAS2R7Q9NYW3 318 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 DUXAA6NLW8 204 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 NOBOXO60393 691 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 PAPSS2O95340 614 aaPredicted RBP16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 CBSLP0DN79 551 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 CBSP35520 551 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 SEC13P55735 322 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 GPX6P59796 221 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 DAG1Q14118 895 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 PCDHAC1Q9H158 963 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 IL36AQ9UHA7 158 aa16.2■□□□□ 0.18
PCDHA1-203ENST00000504120 ALPPP05187 535 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 DDX6P26196 483 aaKnown RBP eCLIP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 PIK3CBP42338 1070 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 FOXM1Q08050 763 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SCARB2Q14108 478 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SUZ12Q15022 739 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 ZFP69Q49AA0 526 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC30A6Q6NXT4 461 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 BRAT1Q6PJG6 821 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 HAVCR1Q96D42 359 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 GPR22Q99680 433 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC29A3Q9BZD2 475 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 PHRF1Q9P1Y6 1649 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 UGT1A6P19224 532 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 UGT1A1P22309 533 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 UGT1A4P22310 534 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 MPIP34949 423 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 UGT1A3P35503 534 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 GRK6P43250 576 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 DNASE1L1P49184 302 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SLC18A2Q05940 514 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 INCA1Q0VD86 236 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 GALNT2Q10471 571 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 PDE12Q6L8Q7 609 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SATL1Q86VE3 508 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 RPL36Q9Y3U8 105 aaKnown RBP16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 PPEF2O14830 753 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 MAGP20916 626 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 AVPR1BP47901 424 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 NRLP54845 237 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 OGDHQ02218 1023 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 CCL14Q16627 93 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 SPIN4Q56A73 249 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 TIFABQ6ZNK6 161 aa16.19■□□□□ 0.18
PCDHA1-203ENST00000504120 HDDC3Q8N4P3 179 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms