RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.3■■□□□ 1
LSM6-203ENST00000503982 CIDEBQ9UHD4 219 aa21.3■■□□□ 1
LSM6-203ENST00000503982 DRG1Q9Y295 367 aaKnown RBP21.3■■□□□ 1
LSM6-203ENST00000503982 CCDC88CQ9P219 2028 aa21.29■■□□□ 1
LSM6-203ENST00000503982 SETXQ7Z333 2677 aaKnown RBP21.29■■□□□ 1
LSM6-203ENST00000503982 K7EM74 188 aa21.29■■□□□ 1
LSM6-203ENST00000503982 AP3B1O00203 1094 aa21.29■■□□□ 1
LSM6-203ENST00000503982 PRMT5O14744 637 aaPredicted RBP21.29■■□□□ 1
LSM6-203ENST00000503982 CXCR5P32302 372 aa21.29■■□□□ 1
LSM6-203ENST00000503982 NPY2RP49146 381 aa21.29■■□□□ 1
LSM6-203ENST00000503982 ACVR1Q04771 509 aa21.29■■□□□ 1
LSM6-203ENST00000503982 SIX1Q15475 284 aaPredicted RBP21.29■■□□□ 1
LSM6-203ENST00000503982 IGFBP7Q16270 282 aa21.29■■□□□ 1
LSM6-203ENST00000503982 C1orf189Q5VU69 101 aa21.29■■□□□ 1
LSM6-203ENST00000503982 MLIPQ5VWP3 458 aa21.29■■□□□ 1
LSM6-203ENST00000503982 TAX1BP1Q86VP1 789 aa21.29■■□□□ 1
LSM6-203ENST00000503982 APLFQ8IW19 511 aaPredicted RBP21.29■■□□□ 1
LSM6-203ENST00000503982 PEX13Q92968 403 aa21.29■■□□□ 1
LSM6-203ENST00000503982 SLC25A23Q9BV35 468 aa21.29■■□□□ 1
LSM6-203ENST00000503982 CARD6Q9BX69 1037 aa21.29■■□□□ 1
LSM6-203ENST00000503982 AP1M1Q9BXS5 423 aa21.29■■□□□ 1
LSM6-203ENST00000503982 NLNQ9BYT8 704 aa21.29■■□□□ 1
LSM6-203ENST00000503982 IL22Q9GZX6 179 aa21.29■■□□□ 1
LSM6-203ENST00000503982 TXLNGQ9NUQ3 528 aa21.29■■□□□ 1
LSM6-203ENST00000503982 GNPTGQ9UJJ9 305 aa21.29■■□□□ 1
LSM6-203ENST00000503982 TCFL5Q9UL49 500 aa21.29■■□□□ 1
LSM6-203ENST00000503982 G3BP2Q9UN86 482 aaKnown RBP21.29■■□□□ 1
LSM6-203ENST00000503982 PADI2Q9Y2J8 665 aa21.29■■□□□ 1
LSM6-203ENST00000503982 MSL3P1P0C860 447 aa21.28■■□□□ 1
LSM6-203ENST00000503982 MGAT1P26572 445 aa21.28■■□□□ 1
LSM6-203ENST00000503982 RORAP35398 523 aa21.28■■□□□ 1
LSM6-203ENST00000503982 PTGIRP43119 386 aa21.28■■□□□ 1
LSM6-203ENST00000503982 VPS41P49754 854 aa21.28■■□□□ 1
LSM6-203ENST00000503982 KIR2DS3Q14952 304 aa21.28■■□□□ 1
LSM6-203ENST00000503982 TRIP13Q15645 432 aaPredicted RBP21.28■■□□□ 1
LSM6-203ENST00000503982 FAM69BQ5VUD6 431 aa21.28■■□□□ 1
LSM6-203ENST00000503982 DRICH1Q6PGQ1 229 aaPredicted RBP21.28■■□□□ 1
LSM6-203ENST00000503982 VRK3Q8IV63 474 aa21.28■■□□□ 1
LSM6-203ENST00000503982 SLC22A15Q8IZD6 547 aa21.28■■□□□ 1
LSM6-203ENST00000503982 PANX3Q96QZ0 392 aa21.28■■□□□ 1
LSM6-203ENST00000503982 ING2Q9H160 280 aa21.28■■□□□ 1
LSM6-203ENST00000503982 FAM60AQ9NP50 221 aa21.28■■□□□ 1
LSM6-203ENST00000503982 MARCH4Q9P2E8 410 aaPredicted RBP21.28■■□□□ 1
LSM6-203ENST00000503982 SLC39A10Q9ULF5 831 aa21.28■■□□□ 1
LSM6-203ENST00000503982 SNX12Q9UMY4 172 aa21.28■■□□□ 1
LSM6-203ENST00000503982 FLNBO75369 2602 aaKnown RBP21.27■■□□□ 1
LSM6-203ENST00000503982 NMBRP28336 390 aa21.27■■□□□ 1
LSM6-203ENST00000503982 RAB28P51157 221 aa21.27■■□□□ 1
LSM6-203ENST00000503982 PGDP52209 483 aa21.27■■□□□ 1
LSM6-203ENST00000503982 EIF3BP55884 814 aaKnown RBP21.27■■□□□ 1
LSM6-203ENST00000503982 ZNF789Q5FWF6 425 aa21.27■■□□□ 1
LSM6-203ENST00000503982 DCUN1D3Q8IWE4 304 aa21.27■■□□□ 1
LSM6-203ENST00000503982 FAM20CQ8IXL6 584 aa21.27■■□□□ 1
LSM6-203ENST00000503982 DPH2Q9BQC3 489 aaPredicted RBP21.27■■□□□ 1
LSM6-203ENST00000503982 SPRTNQ9H040 489 aaPredicted RBP21.27■■□□□ 1
LSM6-203ENST00000503982 HOMER3Q9NSC5 361 aa21.27■■□□□ 1
LSM6-203ENST00000503982 NDOR1Q9UHB4 597 aa21.27■■□□□ 1
LSM6-203ENST00000503982 TSR3Q9UJK0 312 aaKnown RBP21.27■■□□□ 1
LSM6-203ENST00000503982 AP1M2Q9Y6Q5 423 aa21.27■■□□□ 1
LSM6-203ENST00000503982 MED13Q9UHV7 2174 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 PFDN6O15212 129 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 TMEM63AO94886 807 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 PKLRP30613 574 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 OTX2P32243 289 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 SARNPP82979 210 aaKnown RBP21.26■□□□□ 0.99
LSM6-203ENST00000503982 NCF4Q15080 339 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 ZIC1Q15915 447 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 KCTD19Q17RG1 926 aaPredicted RBP21.26■□□□□ 0.99
LSM6-203ENST00000503982 SLC5A12Q1EHB4 618 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 PAPD7Q5XG87 772 aaKnown RBP21.26■□□□□ 0.99
LSM6-203ENST00000503982 CASC4Q6P4E1 433 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 FAM198BQ6UWH4 519 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 CES3Q6UWW8 571 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 UNC5DQ6UXZ4 953 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 ZNF517Q6ZMY9 492 aaPredicted RBP21.26■□□□□ 0.99
LSM6-203ENST00000503982 OTOAQ7RTW8 1153 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 SDCCAG8Q86SQ7 713 aaPredicted RBP21.26■□□□□ 0.99
LSM6-203ENST00000503982 RAB43Q86YS6 212 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 RAB42Q8N4Z0 105 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 ZNF655Q8N720 491 aaPredicted RBP21.26■□□□□ 0.99
LSM6-203ENST00000503982 SGSM3Q96HU1 749 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 IL17FQ96PD4 163 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 C17orf62Q9BQA9 187 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 SYBUQ9NX95 663 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 SEC16AO15027 2179 aa21.26■□□□□ 0.99
LSM6-203ENST00000503982 ASH1LQ9NR48 2969 aaKnown RBP21.25■□□□□ 0.99
LSM6-203ENST00000503982 A6NL46 340 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 ZNF185O15231 689 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 ZSCAN9O15535 394 aaPredicted RBP21.25■□□□□ 0.99
LSM6-203ENST00000503982 GPC4O75487 556 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 TPBGLP0DKB5 382 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 CBSLP0DN79 551 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 TCP1P17987 556 aaKnown RBP21.25■□□□□ 0.99
LSM6-203ENST00000503982 AOAHP28039 575 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 CBSP35520 551 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 SLC9A5Q14940 896 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 KYNUQ16719 465 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 MRNIPQ6NTE8 343 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 LMNTD1Q8N9Z9 388 aa21.25■□□□□ 0.99
LSM6-203ENST00000503982 ACTRT1Q8TDG2 376 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms