RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ALDH4A1P30038 563 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 AKT2P31751 481 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 KRT6CP48668 564 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARSEP51690 589 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 MTTPP55157 894 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 SPIBQ01892 262 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 TNFRSF17Q02223 184 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 CCDC15Q0P6D6 951 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 GAB1Q13480 694 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 KRT33BQ14525 404 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 RPE65Q16518 533 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 USP41Q3LFD5 358 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 SOWAHCQ53LP3 525 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 AADACL4Q5VUY2 407 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANKRD16Q6P6B7 361 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 QSOX2Q6ZRP7 698 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 G2E3Q7L622 706 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 LIMS2Q7Z4I7 341 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 FOXP4Q8IVH2 680 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 MCEMP1Q8IX19 187 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 SRFBP1Q8NEF9 429 aaKnown RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 OR2T3Q8NH03 318 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 C9orf43Q8TAL5 461 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 ACTRT2Q8TDY3 377 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 FIG4Q92562 907 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 RIT1Q92963 219 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 FBXO32Q969P5 355 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 FAM46BQ96A09 425 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 AP2M1Q96CW1 435 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 SNRNP40Q96DI7 357 aaKnown RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 GPR78Q96P69 363 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 PSKH2Q96QS6 385 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 NEU1Q99519 415 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 ADAM2Q99965 735 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 GPR61Q9BZJ8 451 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 AMBRA1Q9C0C7 1298 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 B3GNT4Q9C0J1 378 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 DCTPP1Q9H773 170 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 SLC28A3Q9HAS3 691 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 KLC4Q9NSK0 619 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 AURKAIP1Q9NWT8 199 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 MTMR10Q9NXD2 777 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 ARL15Q9NXU5 204 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 DNAJB4Q9UDY4 337 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 TESQ9UGI8 421 aaKnown RBP4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 IL17BQ9UHF5 180 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 DHDHQ9UQ10 334 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 CEPT1Q9Y6K0 416 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 DUSP10Q9Y6W6 482 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 SPACA6W5XKT8 324 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 ANKRD36CQ5JPF3 1778 aa4.22□□□□□ -1.73
HMGB1P21-201ENST00000502313 UTYO14607 1347 aa4.21□□□□□ -1.73
HMGB1P21-201ENST00000502313 DDX60Q8IY21 1712 aaKnown RBP4.21□□□□□ -1.73
HMGB1P21-201ENST00000502313 SERTM2A0A1B0GWG4 89 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 MFSD2BA6NFX1 497 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 CBY3A6NI87 242 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 GRXCR1A8MXD5 290 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SLC16A3O15427 465 aaKnown RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 TEX28O15482 410 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 BUB1O43683 1085 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 CACNG3O60359 315 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 PRAMEF2O60811 474 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF623O75123 536 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 PMPCBO75439 489 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 CDKL5O76039 1030 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 GLCEO94923 617 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ZNF202O95125 648 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 HIST1H2ABP04908 130 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FGF4P08620 206 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 UBTFL1P0CB47 393 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FCGR2AP12318 317 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 HIST1H2ADP20671 130 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 DDX6P26196 483 aaKnown RBP eCLIP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 HOXD9P28356 352 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SHMT1P34896 483 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 STAT6P42226 847 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 MAGEB1P43366 347 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 GMPSP49915 693 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 HTR6P50406 440 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SCNN1GP51170 649 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 VCPP55072 806 aaKnown RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 TAS2R40P59535 323 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 SUMO2P61956 95 aaKnown RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ACY1Q03154 408 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ITIH3Q06033 890 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ABRQ12979 859 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 PDZK1IP1Q13113 114 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 GALNT3Q14435 633 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 STK11Q15831 433 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 DPYSL2Q16555 572 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ME3Q16798 604 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FILIP1LQ4L180 1135 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 ARL13AQ5H913 290 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 RABL3Q5HYI8 236 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 LCE3BQ5TA77 95 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 DENND2CQ68D51 928 aa4.21□□□□□ -1.74
HMGB1P21-201ENST00000502313 FBXO46Q6PJ61 603 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms