RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 LRRC8CQ8TDW0 803 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 FCAMRQ8WWV6 532 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 UHRF2Q96PU4 802 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 CPNE1Q99829 537 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 RHNO1Q9BSD3 238 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 S1PR5Q9H228 398 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 SDF2L1Q9HCN8 221 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 CPSF3Q9UKF6 684 aaKnown RBP4.41□□□□□ -1.7
VPS36-206ENST00000497149 LIPGQ9Y5X9 500 aa4.41□□□□□ -1.7
VPS36-206ENST00000497149 CLDN4O14493 209 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 HSPA4LO95757 839 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 HSPA8P11142 646 aaKnown RBP4.4□□□□□ -1.71
VPS36-206ENST00000497149 CD22P20273 847 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 TIMP3P35625 211 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 LHX1P48742 406 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 TFCP2Q12800 502 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ZNF273Q14593 569 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 CA9Q16790 459 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ITPRIPL2Q3MIP1 535 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ZC2HC1CQ53FD0 456 aaPredicted RBP4.4□□□□□ -1.71
VPS36-206ENST00000497149 SPECC1Q5M775 1068 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ELFN2Q5R3F8 820 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ARMC3Q5W041 872 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 SLC35E4Q6ICL7 350 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 C11orf63Q6NUN7 778 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 IL27RAQ6UWB1 636 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ARHGAP22Q7Z5H3 698 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 CUZD1Q86UP6 607 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 VSIG1Q86XK7 387 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 TICAM2Q86XR7 235 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 DCUN1D3Q8IWE4 304 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 STPG4Q8N801 248 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ZNF611Q8N823 705 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 MAPKAPK5-AS1Q8N8E1 139 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 THAP8Q8NA92 274 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 TM9SF4Q92544 642 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 EXT2Q93063 718 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 SPSB1Q96BD6 273 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 MOB3AQ96BX8 217 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 SIPA1Q96FS4 1042 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 RAB3IPQ96QF0 476 aaPredicted RBP4.4□□□□□ -1.71
VPS36-206ENST00000497149 EDEM3Q9BZQ6 932 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 LAT2Q9GZY6 243 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 PFDN4Q9NQP4 134 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ZDHHC2Q9UIJ5 367 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 DAPK2Q9UIK4 370 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 ANAPC5Q9UJX4 755 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 KIAA1210Q9ULL0 1709 aa4.4□□□□□ -1.71
VPS36-206ENST00000497149 IGLV9-49A0A0B4J1Y8 123 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 A0A1W2PN81 502 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 PLOD2O00469 737 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 SLC22A2O15244 555 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 CIDEAO60543 219 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 PRKRAO75569 313 aaKnown RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 PENKP01210 267 aaPredicted RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 UMODP07911 640 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 FRMD6-AS1P0C7T7 363 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 FDPSP14324 419 aaKnown RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 JAK1P23458 1154 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 HSPA4P34932 840 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 PTGER4P35408 488 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 CHRNA7P36544 502 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 MNDAP41218 407 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 B3GALT5-AS1P59052 145 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 ZNF415Q09FC8 603 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 SPDYCQ5MJ68 293 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 SFMBT2Q5VUG0 894 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 SUSD1Q6UWL2 747 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 RBMS3Q6XE24 437 aaKnown RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 MEX3BQ6ZN04 569 aaKnown RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 ADCK2Q7Z695 626 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 TRPT1Q86TN4 253 aaKnown RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 OTUB1Q96FW1 271 aaPredicted RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 FNBP1Q96RU3 617 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 RAD9AQ99638 391 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 EGFL8Q99944 293 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 KRTAP1-5Q9BYS1 174 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 CDH20Q9HBT6 801 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 SDR39U1Q9NRG7 319 aaPredicted RBP4.39□□□□□ -1.71
VPS36-206ENST00000497149 GKN1Q9NS71 199 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 SPHK1Q9NYA1 384 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 TBC1D7Q9P0N9 293 aa4.39□□□□□ -1.71
VPS36-206ENST00000497149 LOC101059948A0A1B0GTJ6 334 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 SMIM1B2RUZ4 78 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 DNM1LO00429 736 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 TBCAO75347 108 aaKnown RBP4.38□□□□□ -1.71
VPS36-206ENST00000497149 ACSL3O95573 720 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 SAGP10523 405 aaPredicted RBP4.38□□□□□ -1.71
VPS36-206ENST00000497149 HAPLN1P10915 354 aaPredicted RBP4.38□□□□□ -1.71
VPS36-206ENST00000497149 SCG2P13521 617 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 EFNA1P20827 205 aaPredicted RBP4.38□□□□□ -1.71
VPS36-206ENST00000497149 CA4P22748 312 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 AZGP1P25311 298 aaKnown RBP4.38□□□□□ -1.71
VPS36-206ENST00000497149 CUL3Q13618 768 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 ITGA7Q13683 1181 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 VEZF1Q14119 521 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 UGT3A2Q3SY77 523 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 MCMDC2Q4G0Z9 681 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 CYP4A22Q5TCH4 519 aa4.38□□□□□ -1.71
VPS36-206ENST00000497149 PPP1R21Q6ZMI0 780 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms