RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CHAF1BQ13112 559 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 DNAJC21Q5F1R6 531 aaKnown RBP13.78□□□□□ -0.2
VTI1A-209ENST00000496445 AARS2Q5JTZ9 985 aaKnown RBP13.78□□□□□ -0.2
VTI1A-209ENST00000496445 TCTN3Q6NUS6 607 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 FAM20CQ8IXL6 584 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 PRELID2Q8N945 189 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 TRIM58Q8NG06 486 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 TTC1Q99614 292 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 NLNQ9BYT8 704 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 IL22Q9GZX6 179 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 CHRNA10Q9GZZ6 450 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 P2RY12Q9H244 342 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 SYBUQ9NX95 663 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 CIDEBQ9UHD4 219 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 TCFL5Q9UL49 500 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 SNX7Q9UNH6 387 aa13.78□□□□□ -0.2
VTI1A-209ENST00000496445 ARGFXA6NJG6 315 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 PRMT5O14744 637 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-209ENST00000496445 CEP104O60308 925 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 TPSB2P20231 275 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 RPS3P23396 243 aaKnown RBP eCLIP13.77□□□□□ -0.21
VTI1A-209ENST00000496445 MGAT1P26572 445 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 PTGIRP43119 386 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 TTPAP49638 278 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 RAB28P51157 221 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 NCF4Q15080 339 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 TPSAB1Q15661 275 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 KYNUQ16719 465 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 SLC5A12Q1EHB4 618 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 CTSL3PQ5NE16 218 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 LRRC8BQ6P9F7 803 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 CES3Q6UWW8 571 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 GSTA5Q7RTV2 222 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 MAIP1Q8WWC4 291 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 ASZ1Q8WWH4 475 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 THAP4Q8WY91 577 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 MFSD3Q96ES6 412 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 TCTN2Q96GX1 697 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 TSSK1BQ9BXA7 367 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 SPRTNQ9H040 489 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-209ENST00000496445 MRM3Q9HC36 420 aaKnown RBP13.77□□□□□ -0.21
VTI1A-209ENST00000496445 SERTAD3Q9UJW9 196 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 TTC7AQ9ULT0 858 aaPredicted RBP13.77□□□□□ -0.21
VTI1A-209ENST00000496445 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
VTI1A-209ENST00000496445 PCM1Q15154 2024 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 F8W8V4 182 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 MAP3K7O43318 606 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 SLCO2B1O94956 709 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 CBSLP0DN79 551 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 CBSP35520 551 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 PPARGP37231 505 aaPredicted RBP13.76□□□□□ -0.21
VTI1A-209ENST00000496445 NPY2RP49146 381 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 FOXK1P85037 733 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 KLRB1Q12918 225 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 KCNJ11Q14654 390 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 KIR2DS3Q14952 304 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 TRIP13Q15645 432 aaPredicted RBP13.76□□□□□ -0.21
VTI1A-209ENST00000496445 IGFBP7Q16270 282 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 TTC27Q6P3X3 843 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 UNC5DQ6UXZ4 953 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 C4orf22Q6V702 233 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 ASB18Q6ZVZ8 466 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 TAX1BP1Q86VP1 789 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 HOOK3Q86VS8 718 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 DCUN1D3Q8IWE4 304 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 MPP5Q8N3R9 675 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 DNAJC22Q8N4W6 341 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 IL17FQ96PD4 163 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 KIFC1Q9BW19 673 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 BFARQ9NZS9 450 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 GNPTGQ9UJJ9 305 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 ANAPC5Q9UJX4 755 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 KLHL20Q9Y2M5 609 aa13.76□□□□□ -0.21
VTI1A-209ENST00000496445 UTP20O75691 2785 aaKnown RBP13.76□□□□□ -0.21
VTI1A-209ENST00000496445 USP9XQ93008 2570 aaPredicted RBP13.75□□□□□ -0.21
VTI1A-209ENST00000496445 KRT87PA6NCN2 255 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 ISM1B1AKI9 464 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 GOLGA8KD6RF30 607 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 GOLGA8TH3BQL2 631 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 OR2B3O76000 313 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 APOA4P06727 396 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 HBQ1P09105 142 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 MAGP20916 626 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 BDKRB1P46663 353 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 GCGRP47871 477 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 TERF1P54274 439 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 CCSMST1Q4G0I0 132 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 C1orf189Q5VU69 101 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 ANKRD22Q5VYY1 191 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 GPR135Q8IZ08 494 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 ZBTB2Q8N680 514 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 CFAP61Q8NHU2 1237 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 LPGAT1Q92604 370 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 BIRC8Q96P09 236 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 GBP5Q96PP8 586 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 DPH2Q9BQC3 489 aaPredicted RBP13.75□□□□□ -0.21
VTI1A-209ENST00000496445 TRIM56Q9BRZ2 755 aaKnown RBP13.75□□□□□ -0.21
VTI1A-209ENST00000496445 SLC7A5P2Q9GIP4 190 aa13.75□□□□□ -0.21
VTI1A-209ENST00000496445 ING2Q9H160 280 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms