RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 RARRES3Q9UL19 164 aa15.88■□□□□ 0.13
SF3A1-209ENST00000496189 LHX6Q9UPM6 363 aa15.88■□□□□ 0.13
SF3A1-209ENST00000496189 CDYLQ9Y232 598 aa15.88■□□□□ 0.13
SF3A1-209ENST00000496189 IGHV5-51A0A0C4DH38 117 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 PRDX3P30048 256 aaKnown RBP15.87■□□□□ 0.13
SF3A1-209ENST00000496189 PPP1CAP62136 330 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 CXADRP78310 365 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 CLN3Q13286 438 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 KIR2DS3Q14952 304 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 LRRC8EQ6NSJ5 796 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 CNSTQ6PJW8 725 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 SPESP1Q6UW49 350 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 C3orf62Q6ZUJ4 267 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 CYS1Q717R9 158 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 GALNT7Q86SF2 657 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 VRK3Q8IV63 474 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 OR8K5Q8NH50 307 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 WDR83Q9BRX9 315 aaKnown RBP15.87■□□□□ 0.13
SF3A1-209ENST00000496189 ULBP3Q9BZM4 244 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 LATS2Q9NRM7 1088 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 SIDT1Q9NXL6 827 aaKnown RBP15.87■□□□□ 0.13
SF3A1-209ENST00000496189 ACTR10Q9NZ32 417 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 SEMA5BQ9P283 1151 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 KLHL42Q9P2K6 505 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 LNPEPQ9UIQ6 1025 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 ICKQ9UPZ9 632 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 DMXL2Q8TDJ6 3036 aa15.87■□□□□ 0.13
SF3A1-209ENST00000496189 PABPN1LA6NDY0 278 aaKnown RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 ISM1B1AKI9 464 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 BTN3A3O00478 584 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 CATP04040 527 aaKnown RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 CHRM5P08912 532 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 ENO3P13929 434 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 SKIV2L2P42285 1042 aaKnown RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 RGS4P49798 205 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 SH3BP2P78314 561 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 MPP1Q00013 466 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 ZNF789Q5FWF6 425 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 TEX35Q5T0J7 233 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 TEDDM1Q5T9Z0 273 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 TRMT10BQ6PF06 316 aaKnown RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 CAPN12Q6ZSI9 719 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 SLC26A11Q86WA9 606 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 ADGRF3Q8IZF5 1079 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 CACNA2D3Q8IZS8 1091 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 NLGN4XQ8N0W4 816 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 D2HGDHQ8N465 521 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 NLGN4YQ8NFZ3 816 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 INPP5DQ92835 1189 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 EFHD1Q9BUP0 239 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 SYTL2Q9HCH5 934 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 TAS2R13Q9NYV9 303 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 MOCS1Q9NZB8 636 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 TXNDC16Q9P2K2 825 aa15.86■□□□□ 0.13
SF3A1-209ENST00000496189 TRMT6Q9UJA5 497 aaKnown RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 TSR3Q9UJK0 312 aaKnown RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 CORO1CQ9ULV4 474 aaPredicted RBP15.86■□□□□ 0.13
SF3A1-209ENST00000496189 CACNA1BQ00975 2339 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 SLC9B1P1A6NJY1 282 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 ZNF839A8K0R7 811 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 KRT37O76014 449 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 STK17BO94768 372 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 HAUS5O94927 633 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 SLU7O95391 586 aaKnown RBP15.85■□□□□ 0.13
SF3A1-209ENST00000496189 MT-ND3P03897 115 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 EBLN1P0CF75 366 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 CBSLP0DN79 551 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 FGF5P12034 268 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 MAP4P27816 1152 aaKnown RBP15.85■□□□□ 0.13
SF3A1-209ENST00000496189 PKLRP30613 574 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 SSTR1P30872 391 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 STX2P32856 288 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 PHBP35232 272 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 CBSP35520 551 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 KYNUQ16719 465 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 KLHL38Q2WGJ6 581 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 NEK10Q6ZWH5 1172 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 GPR155Q7Z3F1 870 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 ESX1Q8N693 406 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 ELMO2Q96JJ3 720 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 FCRL4Q96PJ5 515 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 AARSD1Q9BTE6 412 aaKnown RBP15.85■□□□□ 0.13
SF3A1-209ENST00000496189 PLAC1Q9HBJ0 212 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 APMAPQ9HDC9 416 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 FGF21Q9NSA1 209 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 INTS7Q9NVH2 962 aaKnown RBP15.85■□□□□ 0.13
SF3A1-209ENST00000496189 PLAGL1Q9UM63 463 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 BTRCQ9Y297 605 aa15.85■□□□□ 0.13
SF3A1-209ENST00000496189 KMT2BQ9UMN6 2715 aaPredicted RBP15.85■□□□□ 0.13
SF3A1-209ENST00000496189 A0A0J9YY10 115 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 EIF3FO00303 357 aaPredicted RBP15.84■□□□□ 0.13
SF3A1-209ENST00000496189 RASGRF2O14827 1237 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 RAD1O60671 282 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 C1orf105O95561 183 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 AHSGP02765 367 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 CCNYL3P0C7X3 344 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 UGT2B7P16662 529 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 CD9P21926 228 aa15.84■□□□□ 0.13
SF3A1-209ENST00000496189 CLCN7P51798 805 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms