RNA–Protein interactions for RNA: ENST00000494683.1

DENND4B-212, Transcript of DENN domain containing 4B, humanhuman

TSL 3

Gene DENND4B, Length 456 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-212ENST00000494683 RUNDC3BQ96NL0 473 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 EFHD1Q9BUP0 239 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 SEMA4CQ9C0C4 833 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 KLHL25Q9H0H3 589 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 LHX9Q9NQ69 397 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 FBXO6Q9NRD1 293 aaPredicted RBP13.36□□□□□ -0.27
DENND4B-212ENST00000494683 GALPQ9UBC7 116 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 CIDEBQ9UHD4 219 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 CROTQ9UKG9 612 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 RUVBL2Q9Y230 463 aaKnown RBP13.36□□□□□ -0.27
DENND4B-212ENST00000494683 VPS9D1Q9Y2B5 631 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 MED16Q9Y2X0 877 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 MRPS18BQ9Y676 258 aaKnown RBP13.36□□□□□ -0.27
DENND4B-212ENST00000494683 NFS1Q9Y697 457 aa13.36□□□□□ -0.27
DENND4B-212ENST00000494683 FER1L5A0AVI2 2057 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 A0A0J9YY10 115 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 EIF4E1BA6NMX2 242 aaKnown RBP13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CCDC188H7C350 402 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 RASGRF2O14827 1237 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CPNE3O75131 537 aaKnown RBP13.35□□□□□ -0.27
DENND4B-212ENST00000494683 S1PR4O95977 384 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 NTRK1P04629 796 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 ATP5DP30049 168 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 BDKRB1P46663 353 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 DR1Q01658 176 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CTBP1Q13363 440 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 THOC5Q13769 683 aaKnown RBP13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CRYMQ14894 314 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 KIR2DS3Q14952 304 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 ZIC1Q15915 447 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 TBR1Q16650 682 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 SLC5A12Q1EHB4 618 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CCSMST1Q4G0I0 132 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 MSS51Q4VC12 460 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CNSTQ6PJW8 725 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CDHR3Q6ZTQ4 885 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 SYDE1Q6ZW31 735 aaPredicted RBP13.35□□□□□ -0.27
DENND4B-212ENST00000494683 TMEM126BQ8IUX1 230 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 ZBTB2Q8N680 514 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.35□□□□□ -0.27
DENND4B-212ENST00000494683 OR1L3Q8NH93 324 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 IL17FQ96PD4 163 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 TRIM51Q9BSJ1 452 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 FANCEQ9HB96 536 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 SYTL2Q9HCH5 934 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 C20orf96Q9NUD7 363 aaPredicted RBP13.35□□□□□ -0.27
DENND4B-212ENST00000494683 FAM169AQ9Y6X4 670 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 KALRNO60229 2985 aa13.35□□□□□ -0.27
DENND4B-212ENST00000494683 SPTBP11277 2137 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 KRT87PA6NCN2 255 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 TMEM150CB9EJG8 249 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 NKX2-8O15522 239 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 TTI1O43156 1089 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 C1orf105O95561 183 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 CD9P21926 228 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 OAS2P29728 719 aaKnown RBP13.34□□□□□ -0.27
DENND4B-212ENST00000494683 GABRA4P48169 554 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 CLCN7P51798 805 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 MPP1Q00013 466 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 CDC20Q12834 499 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 GPS2Q13227 327 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 DNASE1L3Q13609 305 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 MORF4L2Q15014 288 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 PRAMEF17Q5VTA0 474 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 HIBCHQ6NVY1 386 aaPredicted RBP13.34□□□□□ -0.27
DENND4B-212ENST00000494683 ZNF549Q6P9A3 640 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 KCNMB4Q86W47 210 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 SLC38A9Q8NBW4 561 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 OR2L8Q8NGY9 312 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 GIMAP7Q8NHV1 300 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 GSDMBQ8TAX9 411 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 SKA2Q8WVK7 121 aaPredicted RBP13.34□□□□□ -0.27
DENND4B-212ENST00000494683 SLC30A3Q99726 388 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 EBNA1BP2Q99848 306 aaKnown RBP13.34□□□□□ -0.27
DENND4B-212ENST00000494683 WDR83Q9BRX9 315 aaKnown RBP13.34□□□□□ -0.27
DENND4B-212ENST00000494683 FAM167BQ9BTA0 163 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 CHRNA10Q9GZZ6 450 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 AKIRIN1Q9H9L7 192 aaPredicted RBP13.34□□□□□ -0.27
DENND4B-212ENST00000494683 PLAC1Q9HBJ0 212 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 FAM60AQ9NP50 221 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 TSR3Q9UJK0 312 aaKnown RBP13.34□□□□□ -0.27
DENND4B-212ENST00000494683 PCDHB3Q9Y5E6 796 aa13.34□□□□□ -0.27
DENND4B-212ENST00000494683 ISM1B1AKI9 464 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 E5RI56 91 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 KIF2AO00139 706 aaPredicted RBP13.33□□□□□ -0.28
DENND4B-212ENST00000494683 TP73O15350 636 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 HCRTR1O43613 425 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 SEC31AO94979 1220 aaKnown RBP13.33□□□□□ -0.28
DENND4B-212ENST00000494683 MATN4O95460 622 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 CCNYL3P0C7X3 344 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 CHRM3P20309 590 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 RORAP35398 523 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 DEFB110Q30KQ9 67 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
DENND4B-212ENST00000494683 HSP90AA5PQ58FG0 334 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 ACSBG2Q5FVE4 666 aa13.33□□□□□ -0.28
DENND4B-212ENST00000494683 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.33□□□□□ -0.28
DENND4B-212ENST00000494683 SPANXN3Q5MJ09 141 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms