RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 ATP5F1P24539 256 aaPredicted RBP18.83■□□□□ 0.61
USP39-218ENST00000493829 BIRC2Q13490 618 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 GRB7Q14451 532 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 KIR2DS5Q14953 304 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 PLCL1Q15111 1095 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 TTC19Q6DKK2 380 aaPredicted RBP18.83■□□□□ 0.61
USP39-218ENST00000493829 ZCCHC23Q6ZST2 131 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 OR52E1Q8NGJ3 308 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 OR9A1PQ8NGU1 263 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 MAGEC3Q8TD91 643 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 CAMK1GQ96NX5 476 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 ATG10Q9H0Y0 220 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 MVB12BQ9H7P6 319 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 RDH14Q9HBH5 336 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 ASB1Q9Y576 335 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 CSNK1G3Q9Y6M4 447 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 COLEC10Q9Y6Z7 277 aa18.83■□□□□ 0.61
USP39-218ENST00000493829 MUC6Q6W4X9 2439 aa18.83■□□□□ 0.6
USP39-218ENST00000493829 MYO1CO00159 1063 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 GIMD1P0DJR0 217 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 UBE2IP63279 158 aaKnown RBP18.82■□□□□ 0.6
USP39-218ENST00000493829 HHEXQ03014 270 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 GPR18Q14330 331 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 C6orf132Q5T0Z8 1188 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 RPS27LQ71UM5 84 aaKnown RBP18.82■□□□□ 0.6
USP39-218ENST00000493829 PDPRQ8NCN5 879 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 RAD51AP1Q96B01 352 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 MED8Q96G25 268 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 TMEM237Q96Q45 408 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 TMEM79Q9BSE2 394 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 RXFP3Q9NSD7 469 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 STOX2Q9P2F5 926 aaPredicted RBP18.82■□□□□ 0.6
USP39-218ENST00000493829 OR5K4A6NMS3 321 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 TRIM38O00635 465 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 ZNF806P0C7X5 589 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 BGNP21810 368 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 IMPA1P29218 277 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 EEF1DP29692 281 aaKnown RBP18.82■□□□□ 0.6
USP39-218ENST00000493829 HSPA7P48741 367 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 AP1S2P56377 157 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 GUCY1A3Q02108 690 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 PRR23CQ6ZRP0 262 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 SLC9B2Q86UD5 537 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 NUDCD3Q8IVD9 361 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 SYTL1Q8IYJ3 562 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 SDR16C5Q8N3Y7 309 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 ARL14Q8N4G2 192 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 EID2Q8N6I1 236 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 CCNYL1Q8N7R7 359 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 PYCR2Q96C36 320 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 RHBDF1Q96CC6 855 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 CCDC138Q96M89 665 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 EDEM2Q9BV94 578 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 KIR3DX1Q9H7L2 352 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 SLC40A1Q9NP59 571 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 SEMA4GQ9NTN9 838 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 POT1Q9NUX5 634 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 NLGN3Q9NZ94 848 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 ICKQ9UPZ9 632 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 HCN4Q9Y3Q4 1203 aa18.82■□□□□ 0.6
USP39-218ENST00000493829 WDR87Q6ZQQ6 2873 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 CCDC189A1A4V9 331 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 TAPBPO15533 448 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 IPO13O94829 963 aaKnown RBP18.81■□□□□ 0.6
USP39-218ENST00000493829 XRCC1P18887 633 aaPredicted RBP18.81■□□□□ 0.6
USP39-218ENST00000493829 GDF5P43026 501 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 ALDH18A1P54886 795 aaKnown RBP18.81■□□□□ 0.6
USP39-218ENST00000493829 FASTKQ14296 549 aaKnown RBP18.81■□□□□ 0.6
USP39-218ENST00000493829 SETDB1Q15047 1291 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 CHI3L2Q15782 390 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 C14orf28Q4W4Y0 310 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 RAB44Q7Z6P3 723 aaPredicted RBP18.81■□□□□ 0.6
USP39-218ENST00000493829 SLC35F3Q8IY50 421 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 ARL10Q8N8L6 244 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 FBXO15Q8NCQ5 510 aaPredicted RBP18.81■□□□□ 0.6
USP39-218ENST00000493829 PPP1R14CQ8TAE6 165 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 ZNF480Q8WV37 535 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 PARD6AQ9NPB6 346 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 OXSMQ9NWU1 459 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 POLG2Q9UHN1 485 aa18.81■□□□□ 0.6
USP39-218ENST00000493829 CCNT2O60583 730 aaKnown RBP18.8■□□□□ 0.6
USP39-218ENST00000493829 ALPPL2P10696 532 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 NDUFS1P28331 727 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 CDKL1Q00532 357 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 ZXDCQ2QGD7 858 aaPredicted RBP18.8■□□□□ 0.6
USP39-218ENST00000493829 LIPMQ5VYY2 423 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 SULT1C3Q6IMI6 304 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 AGTRAPQ6RW13 159 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 LCN9Q8WX39 176 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 FBXL8Q96CD0 374 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 PHOX2BQ99453 314 aa18.8■□□□□ 0.6
USP39-218ENST00000493829 STN1Q9H668 368 aaKnown RBP18.8■□□□□ 0.6
USP39-218ENST00000493829 SIGLEC6O43699 453 aa18.79■□□□□ 0.6
USP39-218ENST00000493829 KLK8O60259 260 aa18.79■□□□□ 0.6
USP39-218ENST00000493829 FGF3P11487 239 aaPredicted RBP18.79■□□□□ 0.6
USP39-218ENST00000493829 PNLIPRP1P54315 467 aa18.79■□□□□ 0.6
USP39-218ENST00000493829 PRKAA2P54646 552 aa18.79■□□□□ 0.6
USP39-218ENST00000493829 NAGLUP54802 743 aa18.79■□□□□ 0.6
USP39-218ENST00000493829 NFKB2Q00653 900 aa18.79■□□□□ 0.6
USP39-218ENST00000493829 NAE1Q13564 534 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms