RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 TRIM38O00635 465 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 E2F3O00716 465 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 WNT9AO14904 365 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 PIP5K1BO14986 540 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 PER2O15055 1255 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ANGPT2O15123 496 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 RGS14O43566 566 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 STK16O75716 305 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 SIX3O95343 332 aaPredicted RBP9.81□□□□□ -0.84
PRPF3-206ENST00000493553 KRT6AP02538 564 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 KRT6BP04259 564 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 C1SP09871 688 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ELFN1P0C7U0 828 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 HMOX2P30519 316 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 GKP32189 559 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 GGT5P36269 586 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 MMP12P39900 470 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 CCR10P46092 362 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 NRIP1P48552 1158 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 KRT6CP48668 564 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 TRAP1Q12931 704 aaKnown RBP9.81□□□□□ -0.84
PRPF3-206ENST00000493553 GTF2H2Q13888 395 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 GBX1Q14549 363 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 RCN1Q15293 331 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 PPP1R3AQ16821 1122 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 MSMPQ1L6U9 139 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ATP13A5Q4VNC0 1218 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 KHDC1Q4VXA5 237 aaKnown RBP9.81□□□□□ -0.84
PRPF3-206ENST00000493553 PDCD4Q53EL6 469 aaKnown RBP9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ACSBG2Q5FVE4 666 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 XKR7Q5GH72 579 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 FAM78AQ5JUQ0 283 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 C10orf62Q5T681 223 aaPredicted RBP9.81□□□□□ -0.84
PRPF3-206ENST00000493553 GTF2H2CQ6P1K8 395 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 SBSNQ6UWP8 590 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 MILR1Q7Z6M3 343 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 TSPAN33Q86UF1 283 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ZSWIM9Q86XI8 627 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 PHYKPLQ8IUZ5 450 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 CHST14Q8NCH0 376 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 CATSPER1Q8NEC5 780 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 DNAJB8Q8NHS0 232 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ITFG1Q8TB96 612 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ING5Q8WYH8 240 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 SUSD6Q92537 303 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 RCN3Q96D15 328 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 FBRSQ9HAH7 460 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 SPAG4Q9NPE6 437 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 SEMA4BQ9NPR2 832 aaPredicted RBP9.81□□□□□ -0.84
PRPF3-206ENST00000493553 CROTQ9UKG9 612 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 FIS1Q9Y3D6 152 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 LRRC42Q9Y546 428 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.81□□□□□ -0.84
PRPF3-206ENST00000493553 MYLKQ15746 1914 aa9.81□□□□□ -0.84
PRPF3-206ENST00000493553 ANKRD36A6QL64 1941 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 PTPRSQ13332 1948 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 FAM170BA6NMN3 283 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 A8MUI8 341 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 HEPACAM2A8MVW5 462 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 MRASO14807 208 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 UGDHO60701 494 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 DNAJA2O60884 412 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 RNASEH1O60930 286 aaKnown RBP9.8□□□□□ -0.84
PRPF3-206ENST00000493553 ATG13O75143 517 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 HGFP14210 728 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 HOXB6P17509 224 aaKnown RBP9.8□□□□□ -0.84
PRPF3-206ENST00000493553 GNAZP19086 355 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 LHCGRP22888 699 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 PNLIPRP1P54315 467 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 KCNK10P57789 538 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 PSME3P61289 254 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 CREB5Q02930 508 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 EMX2Q04743 252 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 FCHO2Q0JRZ9 810 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 ATAT1Q5SQI0 421 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 HENMT1Q5T8I9 393 aaKnown RBP9.8□□□□□ -0.84
PRPF3-206ENST00000493553 TMEM198Q66K66 360 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 CLEC6AQ6EIG7 209 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 CES5AQ6NT32 575 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 FBXL19Q6PCT2 694 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 TMC5Q6UXY8 1006 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 RBM23Q86U06 439 aaKnown RBP9.8□□□□□ -0.84
PRPF3-206ENST00000493553 NAT16Q8N8M0 369 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 GLB1L3Q8NCI6 653 aaPredicted RBP9.8□□□□□ -0.84
PRPF3-206ENST00000493553 BTN2A2Q8WVV5 523 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 ASB11Q8WXH4 323 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 FGF13Q92913 245 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 GLYATL1Q969I3 302 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 FAM136AQ96C01 138 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 MRPL38Q96DV4 380 aaKnown RBP9.8□□□□□ -0.84
PRPF3-206ENST00000493553 METTL2AQ96IZ6 378 aaKnown RBP9.8□□□□□ -0.84
PRPF3-206ENST00000493553 PPP1R36Q96LQ0 422 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 SMIM14Q96QK8 99 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 CDRT15Q96T59 188 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 ZBTB18Q99592 522 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 EFHD1Q9BUP0 239 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 HDAC8Q9BY41 377 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 BRINP2Q9C0B6 783 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 IPPKQ9H8X2 491 aa9.8□□□□□ -0.84
PRPF3-206ENST00000493553 SLC28A3Q9HAS3 691 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms