RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 VEZF1Q14119 521 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 TAF13Q15543 124 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 ZRSR1Q15695 479 aaKnown RBP3.68□□□□□ -1.82
CLK1-213ENST00000492793 HYAL4Q2M3T9 481 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 DCAF10Q5QP82 559 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 SFMBT2Q5VUG0 894 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 SLC27A1Q6PCB7 646 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 C19orf48Q6RUI8 117 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 PET117Q6UWS5 81 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 NUP54Q7Z3B4 507 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 GALNTL5Q7Z4T8 443 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 METTL23Q86XA0 190 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 CIARTQ8N365 385 aaPredicted RBP3.68□□□□□ -1.82
CLK1-213ENST00000492793 STPG4Q8N801 248 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 THAP8Q8NA92 274 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 KBTBD8Q8NFY9 601 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 FGFBP3Q8TAT2 258 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 TM9SF4Q92544 642 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 ARSGQ96EG1 525 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 NODALQ96S42 347 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 KATNB1Q9BVA0 655 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 PANK2Q9BZ23 570 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 XAB2Q9HCS7 855 aaKnown RBP3.68□□□□□ -1.82
CLK1-213ENST00000492793 ZNF334Q9HCZ1 680 aaPredicted RBP3.68□□□□□ -1.82
CLK1-213ENST00000492793 Q9N2K0 584 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 COQ3Q9NZJ6 369 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 MTUS1Q9ULD2 1270 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 RIPK3Q9Y572 518 aa3.68□□□□□ -1.82
CLK1-213ENST00000492793 MYH14Q7Z406 1995 aaKnown RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 TRAV34A0A0B4J273 112 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 A0A1W2PRQ8 180 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 PRSS44E7EML9 344 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 BMPR1BO00238 502 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 AP5Z1O43299 807 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 PRKNO60260 465 aaPredicted RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 IGLV2-11P01706 119 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 IGHV2-70P01814 119 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 HSP90AB1P08238 724 aaKnown RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 MYL6BP14649 208 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 CD22P20273 847 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 SP100P23497 879 aaPredicted RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 RPL21P46778 160 aaKnown RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 BMXP51813 675 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 IRX6P78412 446 aaPredicted RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 PRKCZQ05513 592 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 LGALS3BPQ08380 585 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 ZNF415Q09FC8 603 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 TFCP2Q12800 502 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 PPIGQ13427 754 aaKnown RBP eCLIP3.67□□□□□ -1.82
CLK1-213ENST00000492793 CUL3Q13618 768 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 UGP2Q16851 508 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 ODF4Q2M2E3 257 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 MCMDC2Q4G0Z9 681 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 SYT14P1Q58G82 188 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 WDR38Q5JTN6 314 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 CCNYL2Q5T2Q4 361 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 PRR27Q6MZM9 219 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 CAVIN1Q6NZI2 390 aaKnown RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 C18orf65Q6ZTR6 163 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 C11orf57Q6ZUT1 292 aaPredicted RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 SPATA21Q7Z572 469 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 RTN4RL2Q86UN3 420 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 NPEPL1Q8NDH3 523 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 OR11H4Q8NGC9 324 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 EXT2Q93063 718 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 DHX58Q96C10 678 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 SLC47A1Q96FL8 570 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 UHRF2Q96PU4 802 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 FEVQ99581 238 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 EGFL8Q99944 293 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 MGME1Q9BQP7 344 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 EDEM3Q9BZQ6 932 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 ARRDC1-AS1Q9H2J1 176 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 SH3GLB2Q9NR46 395 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 POLLQ9UGP5 575 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 ZDHHC2Q9UIJ5 367 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 LIPGQ9Y5X9 500 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 POMT1Q9Y6A1 747 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 TCF20Q9UGU0 1960 aaKnown RBP3.67□□□□□ -1.82
CLK1-213ENST00000492793 PCDH11YQ9BZA8 1340 aa3.67□□□□□ -1.82
CLK1-213ENST00000492793 A0A0G2JLW4 131 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 A0A1W2PPQ1 181 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 PRKRAO75569 313 aaKnown RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 PIGNO95427 931 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 INHBAP08476 426 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 SAGP10523 405 aaPredicted RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 HAPLN1P10915 354 aaPredicted RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 SCG2P13521 617 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 IRF2P14316 349 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 CDH3P22223 829 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 GP5P40197 560 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 LHX1P48742 406 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 ILF3Q12906 894 aaKnown RBP eCLIP3.66□□□□□ -1.82
CLK1-213ENST00000492793 RRS1Q15050 365 aaKnown RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 ITPRIPL2Q3MIP1 535 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 TECRLQ5HYJ1 363 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 ARHGEF16Q5VV41 709 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 SUSD1Q6UWL2 747 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 CEACAM20Q6UY09 585 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 LINGO4Q6UY18 593 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms